Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_P21
(911 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC637.07 |moe1||translation initiation factor eIF3d Moe1|Schiz... 31 0.30
SPBC800.10c |||EPS15 repeat family actin cortical patch componen... 28 1.6
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 28 2.1
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.8
SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces po... 27 3.7
SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces pom... 27 3.7
SPCC584.14 |mug160||conserved eukaryotic protein|Schizosaccharom... 27 4.9
SPCC1223.08c |dfr1||dihydrofolate reductase Dfr1|Schizosaccharom... 26 8.5
>SPAC637.07 |moe1||translation initiation factor eIF3d
Moe1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 567
Score = 30.7 bits (66), Expect = 0.30
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = +2
Query: 470 VNSEGSWVYEKDVLKITFPLKQ-KQPEDSKRPVAEPTETTPTNVSREEMEFTTESNV--R 640
VNS G+ E + F ++ ++ E+ K + P P S+EE E R
Sbjct: 323 VNSPGALSVEATYINQNFCVQALRETEEEKYKLPHPN---PFYNSKEESEPLAAHGYIYR 379
Query: 641 DVDVGLETAQKTNEIAKAVEATTYAVNIRDDAE 739
DVD+ LET +K ++ E Y N +D +
Sbjct: 380 DVDLSLETDEKPVKLMVRTEVDGYVKNPANDVQ 412
>SPBC800.10c |||EPS15 repeat family actin cortical patch component
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1116
Score = 28.3 bits (60), Expect = 1.6
Identities = 22/100 (22%), Positives = 38/100 (38%)
Frame = +2
Query: 494 YEKDVLKITFPLKQKQPEDSKRPVAEPTETTPTNVSREEMEFTTESNVRDVDVGLETAQK 673
Y V ++ P Q + + +ET P+ S E F T S + + E
Sbjct: 986 YTSAVTELPDPNHQLEMSTTTHVQHPNSETIPS--STENQYFDTTSGAFEANSNTEVTVN 1043
Query: 674 TNEIAKAVEATTYAVNIRDDAEXXADPXXXGXILXXRFSV 793
+NE+++ + T + DD E G + F+V
Sbjct: 1044 SNEVSQPFDFDTANESDNDDDELPVQQVVSGSLANDAFNV 1083
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Frame = -3
Query: 723 MLTAYVVASTAFAI--SLVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVSVGSATGLLL 550
++ + V A+ +F + + V+WA+ T L++++S+ T +SV +A GLLL
Sbjct: 70 IILSIVSAALSFYLDTNAVWWAIRTITHLEIVGLNILSSLKYGSTLFSWISVANAFGLLL 129
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.5 bits (58), Expect = 2.8
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = -3
Query: 717 TAYVVASTAFAISLVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVSVGSATGLLLSS 544
TA +S++ IS + S PTSTS T+ S +S SS + +S S++ SS
Sbjct: 262 TASSSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSS 319
Score = 25.8 bits (54), Expect = 8.5
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 4/82 (4%)
Frame = -3
Query: 699 STAFAISLVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVSVGSATGL----LLSSGCFC 532
ST+ IS + S PTSTS T+ S +S SS + + S+ S++ SS
Sbjct: 285 STSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMSSSSSFSSSPTSSSSTIS 344
Query: 531 FSGKVIFNTSFS*TQLPSEFTS 466
S ++SFS T S+ +S
Sbjct: 345 SSSSSPSSSSFSSTTSSSKSSS 366
>SPAC17G6.03 |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 635
Score = 27.1 bits (57), Expect = 3.7
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
Frame = -3
Query: 702 ASTAFAISLVFWAVSKPTSTSRTLLSVVNSISSRLTFVGVVSVGSATGLLLSSGC----F 535
AS +F+ S + W S+T S N+ G+ A GLL GC F
Sbjct: 343 ASVSFSRSYIDWNPEGFMFHSKTKKSSFNTSLGEFISNGIYEARKALGLLTPIGCSPKKF 402
Query: 534 CFSGKVIFNTSFS 496
FS +V FN S S
Sbjct: 403 AFS-EVPFNDSNS 414
>SPCC2H8.05c ||SPCC63.01c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 217
Score = 27.1 bits (57), Expect = 3.7
Identities = 13/61 (21%), Positives = 28/61 (45%)
Frame = +2
Query: 557 RPVAEPTETTPTNVSREEMEFTTESNVRDVDVGLETAQKTNEIAKAVEATTYAVNIRDDA 736
R + ++ V E+ E T + DV++ + + + N +A+ + T+ + DD
Sbjct: 118 RQTIDRKKSLERRVREEQEEKTDNEDDNDVEISTQESLENNGLAEKKDDTSSLATLEDDI 177
Query: 737 E 739
E
Sbjct: 178 E 178
>SPCC584.14 |mug160||conserved eukaryotic
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 431
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +3
Query: 174 HYDPFSPYVRE-SMLDTHSLWSNLVQRNATLG 266
+YD ++PY+RE S+L T L N ++ +G
Sbjct: 361 NYDDWNPYIREISVLCTRLLLQNNIENQKIIG 392
>SPCC1223.08c |dfr1||dihydrofolate reductase
Dfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 461
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +2
Query: 77 PRELIALVVVRTAGGGLGRATVLPW 151
PR+L +V V + G+G+ +PW
Sbjct: 231 PRDLTMIVAVSSPNLGIGKKNSMPW 255
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,912,350
Number of Sequences: 5004
Number of extensions: 56141
Number of successful extensions: 186
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 462505890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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