BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_P21
(911 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071148-1|AAL48770.1| 431|Drosophila melanogaster RE18101p pro... 31 2.9
AE014134-2195|AAF53184.2| 431|Drosophila melanogaster CG31764-P... 31 2.9
AE014134-2194|AAF53185.2| 431|Drosophila melanogaster CG31764-P... 31 2.9
U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type ... 29 6.7
AY058601-1|AAL13830.1| 1148|Drosophila melanogaster LD29239p pro... 29 6.7
AE014298-2906|AAF48996.2| 2111|Drosophila melanogaster CG14215-P... 29 6.7
AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA... 29 6.7
AY051431-1|AAK92855.1| 456|Drosophila melanogaster GH10642p pro... 29 8.8
AE013599-934|AAM68799.1| 456|Drosophila melanogaster CG1623-PE,... 29 8.8
AE013599-933|AAM68798.1| 456|Drosophila melanogaster CG1623-PD,... 29 8.8
AE013599-932|AAM68797.1| 456|Drosophila melanogaster CG1623-PC,... 29 8.8
AE013599-931|AAM68796.1| 456|Drosophila melanogaster CG1623-PB,... 29 8.8
AE013599-930|AAF58896.1| 456|Drosophila melanogaster CG1623-PA,... 29 8.8
>AY071148-1|AAL48770.1| 431|Drosophila melanogaster RE18101p
protein.
Length = 431
Score = 30.7 bits (66), Expect = 2.9
Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = +2
Query: 533 QKQPEDSK-RPVAEPTETTPTNVS 601
+KQP+D++ R + EP TTPTN S
Sbjct: 218 EKQPQDNEVRDIDEPKSTTPTNTS 241
>AE014134-2195|AAF53184.2| 431|Drosophila melanogaster CG31764-PB,
isoform B protein.
Length = 431
Score = 30.7 bits (66), Expect = 2.9
Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = +2
Query: 533 QKQPEDSK-RPVAEPTETTPTNVS 601
+KQP+D++ R + EP TTPTN S
Sbjct: 218 EKQPQDNEVRDIDEPKSTTPTNTS 241
>AE014134-2194|AAF53185.2| 431|Drosophila melanogaster CG31764-PA,
isoform A protein.
Length = 431
Score = 30.7 bits (66), Expect = 2.9
Identities = 13/24 (54%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = +2
Query: 533 QKQPEDSK-RPVAEPTETTPTNVS 601
+KQP+D++ R + EP TTPTN S
Sbjct: 218 EKQPQDNEVRDIDEPKSTTPTNTS 241
>U65431-1|AAB64082.1| 1761|Drosophila melanogaster collagen type IV
alpha 2 protein.
Length = 1761
Score = 29.5 bits (63), Expect = 6.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 219 CPTCFPERKG*RGRNGDTANVTSHGS 142
CP C +G RG+ GDT SHG+
Sbjct: 528 CPVCNAGPRGPRGQEGDTGYPGSHGN 553
>AY058601-1|AAL13830.1| 1148|Drosophila melanogaster LD29239p
protein.
Length = 1148
Score = 29.5 bits (63), Expect = 6.7
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 530 KQKQPEDSKRPVAEPTETTPTNVSREEMEFTTESNVR-DVDVGLE 661
K QPE K E E TP+N S +EF+ + R D+D+G+E
Sbjct: 708 KDTQPEQRKDWPME--EETPSNESVATVEFSEQKQPRADMDIGME 750
>AE014298-2906|AAF48996.2| 2111|Drosophila melanogaster CG14215-PA
protein.
Length = 2111
Score = 29.5 bits (63), Expect = 6.7
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 530 KQKQPEDSKRPVAEPTETTPTNVSREEMEFTTESNVR-DVDVGLE 661
K QPE K E E TP+N S +EF+ + R D+D+G+E
Sbjct: 1671 KDTQPEQRKDWPME--EETPSNESVATVEFSEQKQPRADMDIGME 1713
>AE014134-843|AAF52203.1| 1940|Drosophila melanogaster CG16858-PA
protein.
Length = 1940
Score = 29.5 bits (63), Expect = 6.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 219 CPTCFPERKG*RGRNGDTANVTSHGS 142
CP C +G RG+ GDT SHG+
Sbjct: 528 CPVCNAGPRGPRGQEGDTGYPGSHGN 553
>AY051431-1|AAK92855.1| 456|Drosophila melanogaster GH10642p
protein.
Length = 456
Score = 29.1 bits (62), Expect = 8.8
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +2
Query: 509 LKITFPLKQKQPEDSKRPVAEPTE--TTPTNVSREEMEFTTESNVRDVDVGLETAQKTNE 682
L+I P+ +K E+ K V TT +++ E E + + + + E
Sbjct: 203 LEIPAPVAEKVEEEEKVEVQPQVAAVTTSALITKPEPEDPVSNGHSEEPKNSDVGPE--E 260
Query: 683 IAKAVEATTYAVNIRDDAEXXADP 754
+AKA+E AV D+AE A P
Sbjct: 261 VAKAIEQVNQAVAGEDEAEVEATP 284
>AE013599-934|AAM68799.1| 456|Drosophila melanogaster CG1623-PE,
isoform E protein.
Length = 456
Score = 29.1 bits (62), Expect = 8.8
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +2
Query: 509 LKITFPLKQKQPEDSKRPVAEPTE--TTPTNVSREEMEFTTESNVRDVDVGLETAQKTNE 682
L+I P+ +K E+ K V TT +++ E E + + + + E
Sbjct: 203 LEIPAPVAEKVEEEEKVEVQPQVAAVTTSALITKPEPEDPVSNGHSEEPKNSDVGPE--E 260
Query: 683 IAKAVEATTYAVNIRDDAEXXADP 754
+AKA+E AV D+AE A P
Sbjct: 261 VAKAIEQVNQAVAGEDEAEVEATP 284
>AE013599-933|AAM68798.1| 456|Drosophila melanogaster CG1623-PD,
isoform D protein.
Length = 456
Score = 29.1 bits (62), Expect = 8.8
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +2
Query: 509 LKITFPLKQKQPEDSKRPVAEPTE--TTPTNVSREEMEFTTESNVRDVDVGLETAQKTNE 682
L+I P+ +K E+ K V TT +++ E E + + + + E
Sbjct: 203 LEIPAPVAEKVEEEEKVEVQPQVAAVTTSALITKPEPEDPVSNGHSEEPKNSDVGPE--E 260
Query: 683 IAKAVEATTYAVNIRDDAEXXADP 754
+AKA+E AV D+AE A P
Sbjct: 261 VAKAIEQVNQAVAGEDEAEVEATP 284
>AE013599-932|AAM68797.1| 456|Drosophila melanogaster CG1623-PC,
isoform C protein.
Length = 456
Score = 29.1 bits (62), Expect = 8.8
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +2
Query: 509 LKITFPLKQKQPEDSKRPVAEPTE--TTPTNVSREEMEFTTESNVRDVDVGLETAQKTNE 682
L+I P+ +K E+ K V TT +++ E E + + + + E
Sbjct: 203 LEIPAPVAEKVEEEEKVEVQPQVAAVTTSALITKPEPEDPVSNGHSEEPKNSDVGPE--E 260
Query: 683 IAKAVEATTYAVNIRDDAEXXADP 754
+AKA+E AV D+AE A P
Sbjct: 261 VAKAIEQVNQAVAGEDEAEVEATP 284
>AE013599-931|AAM68796.1| 456|Drosophila melanogaster CG1623-PB,
isoform B protein.
Length = 456
Score = 29.1 bits (62), Expect = 8.8
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +2
Query: 509 LKITFPLKQKQPEDSKRPVAEPTE--TTPTNVSREEMEFTTESNVRDVDVGLETAQKTNE 682
L+I P+ +K E+ K V TT +++ E E + + + + E
Sbjct: 203 LEIPAPVAEKVEEEEKVEVQPQVAAVTTSALITKPEPEDPVSNGHSEEPKNSDVGPE--E 260
Query: 683 IAKAVEATTYAVNIRDDAEXXADP 754
+AKA+E AV D+AE A P
Sbjct: 261 VAKAIEQVNQAVAGEDEAEVEATP 284
>AE013599-930|AAF58896.1| 456|Drosophila melanogaster CG1623-PA,
isoform A protein.
Length = 456
Score = 29.1 bits (62), Expect = 8.8
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Frame = +2
Query: 509 LKITFPLKQKQPEDSKRPVAEPTE--TTPTNVSREEMEFTTESNVRDVDVGLETAQKTNE 682
L+I P+ +K E+ K V TT +++ E E + + + + E
Sbjct: 203 LEIPAPVAEKVEEEEKVEVQPQVAAVTTSALITKPEPEDPVSNGHSEEPKNSDVGPE--E 260
Query: 683 IAKAVEATTYAVNIRDDAEXXADP 754
+AKA+E AV D+AE A P
Sbjct: 261 VAKAIEQVNQAVAGEDEAEVEATP 284
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,388,150
Number of Sequences: 53049
Number of extensions: 660884
Number of successful extensions: 2123
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2118
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4464466254
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -