Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_P20
         (896 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    32   0.54 
03_06_0149 - 31987183-31987630,31987813-31987874                       29   5.0  
06_03_0824 + 25105450-25105482,25105649-25106485,25106580-251067...    29   6.6  
03_02_0225 + 6565337-6565369,6565564-6565734,6566113-6566400,656...    29   6.6  

>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 32.3 bits (70), Expect = 0.54
 Identities = 17/53 (32%), Positives = 22/53 (41%)
 Frame = +1

Query: 526 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTXRIPLEAPSCALLFRPCRLP 684
           CWR  +        T  D Q    +    +KD   IP + PSC L+F P   P
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQP 335


>03_06_0149 - 31987183-31987630,31987813-31987874
          Length = 169

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -1

Query: 734 AMXKRHASRREKGGQVSGKRQGRNRRAHEGASRGIRXV 621
           A+ + H   R +   +  +R+GR R AHEG   G   V
Sbjct: 76  AVARGHGLERLQEAGIEAERRGRRRNAHEGIKIGAEPV 113


>06_03_0824 +
           25105450-25105482,25105649-25106485,25106580-25106738,
           25106830-25106886,25106971-25107202,25107338-25107638,
           25107703-25107976,25108051-25108152,25108244-25108525
          Length = 758

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 16/52 (30%), Positives = 21/52 (40%)
 Frame = +1

Query: 529 WRFSIGSAPLTSITKIDAQVRGGETRQDYKDTXRIPLEAPSCALLFRPCRLP 684
           WR  +        T  D Q    +    +KD   IP + PSC L+F P   P
Sbjct: 622 WRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQP 673


>03_02_0225 +
           6565337-6565369,6565564-6565734,6566113-6566400,
           6566495-6566653,6566745-6566801,6566886-6567117,
           6567253-6567553,6567618-6567891,6567966-6568067,
           6568159-6568440
          Length = 632

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 16/52 (30%), Positives = 21/52 (40%)
 Frame = +1

Query: 529 WRFSIGSAPLTSITKIDAQVRGGETRQDYKDTXRIPLEAPSCALLFRPCRLP 684
           WR  +        T  D Q    +    +KD   IP + PSC L+F P   P
Sbjct: 496 WRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQP 547


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,140,943
Number of Sequences: 37544
Number of extensions: 467133
Number of successful extensions: 1313
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1313
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)