Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_P18
         (989 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    27   0.66 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   2.3  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.6  

>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 27.5 bits (58), Expect = 0.66
 Identities = 16/45 (35%), Positives = 16/45 (35%)
 Frame = -2

Query: 679 PGGGXXPXXGPXAPXVFSRGXPPRXGXXXXPPPXGGGXXXPPPPG 545
           P  G  P  GP          PPR G    P P   G   P PPG
Sbjct: 181 PNPGMPP--GPQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPG 223


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 2.6
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +1

Query: 688 GGGXXPPXPPPPRG 729
           GG   PP PPPP G
Sbjct: 525 GGPLGPPPPPPPGG 538



 Score = 23.0 bits (47), Expect(2) = 2.3
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = +1

Query: 799 PGXPPPGXPPXGXXPLXPPGGXXG 870
           P  PPP  PP G  P    GG  G
Sbjct: 583 PAPPPP--PPMGPPPSPLAGGPLG 604



 Score = 20.6 bits (41), Expect(2) = 2.3
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +1

Query: 703 PPXPPPP 723
           PP PPPP
Sbjct: 582 PPAPPPP 588


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 25.4 bits (53), Expect = 2.6
 Identities = 13/40 (32%), Positives = 15/40 (37%)
 Frame = +3

Query: 543 GPGGGGXXXPPPXGGGXXXXPXRGGXPREKTXGAXGPXXG 662
           G GGG    P P GGG      R    R++     G   G
Sbjct: 213 GGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGG 252



 Score = 24.2 bits (50), Expect = 6.1
 Identities = 17/57 (29%), Positives = 17/57 (29%), Gaps = 1/57 (1%)
 Frame = -1

Query: 869 PXXPPGGXRGXXPXGGXPGGGXPG-XXXXPXXXXXXXXXXXXGXFXGXPRGGGGXGG 702
           P    GG  G  P GG    G PG                      G   GGGG GG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGGG 256


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 498,995
Number of Sequences: 2352
Number of extensions: 8013
Number of successful extensions: 50
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 108530136
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)