Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_P17
(898 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457024-1|CAG33305.1| 137|Homo sapiens RPL28 protein. 93 1e-18
BC011582-1|AAH11582.1| 137|Homo sapiens ribosomal protein L28 p... 93 1e-18
BC010182-1|AAH10182.1| 137|Homo sapiens ribosomal protein L28 p... 93 1e-18
BC010173-1|AAH10173.1| 137|Homo sapiens ribosomal protein L28 p... 93 1e-18
U14969-1|AAA85657.1| 137|Homo sapiens ribosomal protein L28 pro... 92 3e-18
AB007179-1|BAA25838.1| 53|Homo sapiens ribosomal protein L28 p... 48 3e-05
AB209627-1|BAD92864.1| 95|Homo sapiens ribosomal protein L28 v... 44 6e-04
M34667-1|AAA36452.1| 1290|Homo sapiens protein ( Human phospholi... 31 4.3
DQ297143-1|ABB84466.1| 1291|Homo sapiens phospholipase C, gamma ... 31 4.3
AL022394-3|CAA18537.1| 1290|Homo sapiens phospholipase C, gamma ... 31 4.3
AL022394-2|CAM28260.1| 1291|Homo sapiens phospholipase C, gamma ... 31 4.3
AB210028-1|BAE06110.1| 1412|Homo sapiens PLCG1 variant protein p... 31 4.3
>CR457024-1|CAG33305.1| 137|Homo sapiens RPL28 protein.
Length = 137
Score = 93.1 bits (221), Expect = 1e-18
Identities = 46/126 (36%), Positives = 76/126 (60%)
Frame = +2
Query: 116 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRXQRLDSQESRWCRGEP*QE 295
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFR L +++ +
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 296 GIHXSVQESKGYQKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAIL 475
G+ ++ G +KPA + +R AR +L ++ +++ N YR DL A +RRASAIL
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAIL 118
Query: 476 RSQRPI 493
RSQ+P+
Sbjct: 119 RSQKPV 124
>BC011582-1|AAH11582.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 93.1 bits (221), Expect = 1e-18
Identities = 46/126 (36%), Positives = 76/126 (60%)
Frame = +2
Query: 116 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRXQRLDSQESRWCRGEP*QE 295
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFR L +++ +
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 296 GIHXSVQESKGYQKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAIL 475
G+ ++ G +KPA + +R AR +L ++ +++ N YR DL A +RRASAIL
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAIL 118
Query: 476 RSQRPI 493
RSQ+P+
Sbjct: 119 RSQKPV 124
>BC010182-1|AAH10182.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 93.1 bits (221), Expect = 1e-18
Identities = 46/126 (36%), Positives = 76/126 (60%)
Frame = +2
Query: 116 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRXQRLDSQESRWCRGEP*QE 295
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFR L +++ +
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 296 GIHXSVQESKGYQKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAIL 475
G+ ++ G +KPA + +R AR +L ++ +++ N YR DL A +RRASAIL
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINRNARATLSSIRHMIRKNKYRPDLRMAAIRRASAIL 118
Query: 476 RSQRPI 493
RSQ+P+
Sbjct: 119 RSQKPV 124
>BC010173-1|AAH10173.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 93.1 bits (221), Expect = 1e-18
Identities = 46/126 (36%), Positives = 76/126 (60%)
Frame = +2
Query: 116 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRXQRLDSQESRWCRGEP*QE 295
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFR L +++ +
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 296 GIHXSVQESKGYQKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAIL 475
G+ ++ G +KPA + +R AR +L ++ +++ N YR DL A +RRASAIL
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAIL 118
Query: 476 RSQRPI 493
RSQ+P+
Sbjct: 119 RSQKPV 124
>U14969-1|AAA85657.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 91.9 bits (218), Expect = 3e-18
Identities = 45/126 (35%), Positives = 76/126 (60%)
Frame = +2
Query: 116 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRXQRLDSQESRWCRGEP*QE 295
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFR L +++ +
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 296 GIHXSVQESKGYQKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAIL 475
G+ ++ G +KPA + +R AR +L ++ +++ N YR DL A +RRASAIL
Sbjct: 59 GVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAIL 118
Query: 476 RSQRPI 493
R+Q+P+
Sbjct: 119 RTQKPV 124
>AB007179-1|BAA25838.1| 53|Homo sapiens ribosomal protein L28
protein.
Length = 53
Score = 48.4 bits (110), Expect = 3e-05
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +2
Query: 353 IRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAILRSQRPI 493
+R AR +L ++ +++ N YR DL A +RRASAILRSQ+P+
Sbjct: 4 VRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILRSQKPV 50
>AB209627-1|BAD92864.1| 95|Homo sapiens ribosomal protein L28
variant protein.
Length = 95
Score = 44.4 bits (100), Expect = 6e-04
Identities = 20/45 (44%), Positives = 31/45 (68%)
Frame = +2
Query: 116 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRXQRL 250
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFR L
Sbjct: 9 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGL 51
Score = 35.5 bits (78), Expect = 0.26
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +3
Query: 240 YNGLIHKKAVGVVENPDRKGFTVVYKK 320
YNGLIH+K VGV D KG VV K+
Sbjct: 48 YNGLIHRKTVGVEPAADGKGVVVVIKR 74
>M34667-1|AAA36452.1| 1290|Homo sapiens protein ( Human
phospholipase C-gamma mRNA, complete cds. ).
Length = 1290
Score = 31.5 bits (68), Expect = 4.3
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = -1
Query: 550 LSAY-KLFRLGCGCLSLFCFDGPLG 479
L AY + R+GC C+ L C+DGP G
Sbjct: 350 LEAYARCLRMGCRCIELDCWDGPDG 374
>DQ297143-1|ABB84466.1| 1291|Homo sapiens phospholipase C, gamma 1
protein.
Length = 1291
Score = 31.5 bits (68), Expect = 4.3
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = -1
Query: 550 LSAY-KLFRLGCGCLSLFCFDGPLG 479
L AY + R+GC C+ L C+DGP G
Sbjct: 350 LEAYARCLRMGCRCIELDCWDGPDG 374
>AL022394-3|CAA18537.1| 1290|Homo sapiens phospholipase C, gamma 1
protein.
Length = 1290
Score = 31.5 bits (68), Expect = 4.3
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = -1
Query: 550 LSAY-KLFRLGCGCLSLFCFDGPLG 479
L AY + R+GC C+ L C+DGP G
Sbjct: 350 LEAYARCLRMGCRCIELDCWDGPDG 374
>AL022394-2|CAM28260.1| 1291|Homo sapiens phospholipase C, gamma 1
protein.
Length = 1291
Score = 31.5 bits (68), Expect = 4.3
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = -1
Query: 550 LSAY-KLFRLGCGCLSLFCFDGPLG 479
L AY + R+GC C+ L C+DGP G
Sbjct: 350 LEAYARCLRMGCRCIELDCWDGPDG 374
>AB210028-1|BAE06110.1| 1412|Homo sapiens PLCG1 variant protein
protein.
Length = 1412
Score = 31.5 bits (68), Expect = 4.3
Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = -1
Query: 550 LSAY-KLFRLGCGCLSLFCFDGPLG 479
L AY + R+GC C+ L C+DGP G
Sbjct: 472 LEAYARCLRMGCRCIELDCWDGPDG 496
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,933,370
Number of Sequences: 237096
Number of extensions: 1966094
Number of successful extensions: 14801
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14784
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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