Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_P16
         (897 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    31   1.6  
06_03_0218 + 18219956-18220555                                         28   8.8  
05_04_0142 - 18372751-18373338                                         28   8.8  
03_06_0149 - 31987183-31987630,31987813-31987874                       28   8.8  
03_04_0061 - 16949038-16950006                                         28   8.8  
01_07_0185 + 41854199-41855069,41855177-41855610                       28   8.8  

>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = +3

Query: 510 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 668
           CWR  +        T  D Q    +    +KD    P + PSC L+F P   P
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQP 335


>06_03_0218 + 18219956-18220555
          Length = 199

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = -3

Query: 697 SRREKGGQVSG--KRQGRNRRAHEGASRGKRLVS 602
           +RRE+  + +G  KR+GR R    G  RGKR  S
Sbjct: 106 ARRERRLEAAGAEKREGRRRGGSSGGLRGKRRAS 139


>05_04_0142 - 18372751-18373338
          Length = 195

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 18/62 (29%), Positives = 29/62 (46%)
 Frame = -3

Query: 775 TAQXGRRTTYXRTEIPTA*AMRKRHASRREKGGQVSGKRQGRNRRAHEGASRGKRLVSL* 596
           T+     ++Y  T      +   R     E+GG   G++QGR R+A   A R +RL +  
Sbjct: 36  TSGSAASSSYPSTSGSAGSSSSGRRVEEEEQGGGGGGRKQGRRRKAVARAIR-ERLPAAV 94

Query: 595 SC 590
           +C
Sbjct: 95  AC 96


>03_06_0149 - 31987183-31987630,31987813-31987874
          Length = 169

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 718 AMRKRHASRREKGGQVSGKRQGRNRRAHEGASRG 617
           A+ + H   R +   +  +R+GR R AHEG   G
Sbjct: 76  AVARGHGLERLQEAGIEAERRGRRRNAHEGIKIG 109


>03_04_0061 - 16949038-16950006
          Length = 322

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 14/39 (35%), Positives = 22/39 (56%)
 Frame = +1

Query: 592 RTIKIPGVSPWKLPRALSCSDPAAYRIPVRLSPFGKRGA 708
           RT+K PG+   ++PRA+  + P  Y   VR +   +R A
Sbjct: 255 RTMKGPGLGGARVPRAVFRASPRRYYAAVRTARKARRSA 293


>01_07_0185 + 41854199-41855069,41855177-41855610
          Length = 434

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 21/66 (31%), Positives = 28/66 (42%)
 Frame = -3

Query: 802 VGLNGGFVHTAQXGRRTTYXRTEIPTA*AMRKRHASRREKGGQVSGKRQGRNRRAHEGAS 623
           +G N G    A   R     RT +P    MR   +S    GG+ +    G   R   GA+
Sbjct: 16  LGSNDGL--PADHARGGAIVRTALPNY--MRATSSSDARGGGREAAAATGAPPRRERGAA 71

Query: 622 RGKRLV 605
           RGK +V
Sbjct: 72  RGKAMV 77


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,308,287
Number of Sequences: 37544
Number of extensions: 567066
Number of successful extensions: 1763
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1763
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)