SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_P14
         (959 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U57847-1|AAB02266.1|   84|Homo sapiens ribosomal protein S27 pro...    73   2e-12
L19739-1|AAA59867.1|   84|Homo sapiens metallopanstimulin protein.     73   2e-12
BC070219-1|AAH70219.1|   84|Homo sapiens ribosomal protein S27 (...    73   2e-12
BC002658-1|AAH02658.1|   84|Homo sapiens ribosomal protein S27 (...    73   2e-12
AL358472-19|CAI14033.1|   84|Homo sapiens ribosomal protein S27 ...    73   2e-12
AB061845-1|BAB79483.1|   84|Homo sapiens ribosomal protein S27 p...    73   2e-12
BC003667-1|AAH03667.1|   84|Homo sapiens ribosomal protein S27-l...    72   3e-12
BC047648-1|AAH47648.1|  113|Homo sapiens RPS27L protein protein.       60   9e-09
AB007162-1|BAA25825.1|   69|Homo sapiens ribosomal protein S27 p...    57   1e-07
AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.     37   0.13 
X67337-1|CAA47752.1|  551|Homo sapiens Human pre-mRNA cleavage f...    33   1.5  
X67336-1|CAA47751.1|  551|Homo sapiens HPBRII-7 protein.               33   1.5  
K03208-1|AAA60189.1|  251|Homo sapiens PRB2 protein.                   33   1.5  
BC095481-1|AAH95481.1|  591|Homo sapiens enabled homolog (Drosop...    33   1.5  
BC065238-1|AAH65238.1|  527|Homo sapiens ENAH protein protein.         33   1.5  
BC005000-1|AAH05000.1|  478|Homo sapiens CPSF6 protein protein.        33   1.5  
BC000714-1|AAH00714.1|  588|Homo sapiens CPSF6 protein protein.        33   1.5  
AY345143-1|AAR04685.1|  570|Homo sapiens MENA protein.                 33   1.5  
AL591380-2|CAH71476.1|  570|Homo sapiens enabled homolog (Drosop...    33   1.5  
AL591380-1|CAH71475.1|  817|Homo sapiens enabled homolog (Drosop...    33   1.5  
AL356216-3|CAI22019.1|  570|Homo sapiens enabled homolog (Drosop...    33   1.5  
AL356216-2|CAI22020.1|  817|Homo sapiens enabled homolog (Drosop...    33   1.5  
AK223568-1|BAD97288.1|  551|Homo sapiens cleavage and polyadenyl...    33   1.5  
AK096246-1|BAC04736.1|  467|Homo sapiens protein ( Homo sapiens ...    33   1.5  
AF519769-1|AAQ08487.1|  591|Homo sapiens mena protein protein.         33   1.5  
U19927-1|AAC50140.1|  502|Homo sapiens WAS protein.                    33   2.0  
U12707-1|AAA62663.1|  502|Homo sapiens Wiskott-Aldrich syndrome ...    33   2.0  
BC012738-1|AAH12738.1|  502|Homo sapiens Wiskott-Aldrich syndrom...    33   2.0  
BC002961-1|AAH02961.1|  514|Homo sapiens WAS protein protein.          33   2.0  
AF115549-1|AAD26691.1|  502|Homo sapiens Wiskott-Aldrich Syndrom...    33   2.0  
BC073988-1|AAH73988.1|  682|Homo sapiens FMNL1 protein protein.        32   2.7  
BC044636-1|AAH44636.1|  520|Homo sapiens YLPM1 protein protein.        32   2.7  
BC023532-1|AAH23532.1|  641|Homo sapiens WW domain binding prote...    32   2.7  
BC016441-1|AAH16441.2|  400|Homo sapiens WBP11 protein protein.        32   2.7  
BC001621-1|AAH01621.1|  641|Homo sapiens WW domain binding prote...    32   2.7  
AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.     32   2.7  
AK090435-1|BAC03416.1| 1766|Homo sapiens FLJ00353 protein protein.     32   2.7  
AF432213-1|AAL99920.1|  991|Homo sapiens CLL-associated antigen ...    32   2.7  
AF118023-1|AAD30425.1|  641|Homo sapiens SH3 domain-binding prot...    32   2.7  
AB029309-1|BAA88410.1|  641|Homo sapiens Npw38-binding protein N...    32   2.7  
X07704-1|CAA30542.1|  234|Homo sapiens Po protein protein.             32   3.6  
L21990-1|AAA60301.1|  464|Homo sapiens spiceosomal protein protein.    32   3.6  
BC015804-1|AAH15804.1|  481|Homo sapiens SF3A2 protein protein.        32   3.6  
BC009903-1|AAH09903.1|  464|Homo sapiens splicing factor 3a, sub...    32   3.6  
BC004434-1|AAH04434.1|  464|Homo sapiens splicing factor 3a, sub...    32   3.6  
AC005263-1|AAC25613.1|  464|Homo sapiens SP62_HUMAN protein.           32   3.6  
BC038446-1|AAH38446.1|  673|Homo sapiens SF1 protein protein.          31   4.7  
BC034003-1|AAH34003.1|  600|Homo sapiens PRR12 protein protein.        31   8.2  
AK091050-1|BAC03574.1|  723|Homo sapiens protein ( Homo sapiens ...    31   8.2  
AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.     31   8.2  

>U57847-1|AAB02266.1|   84|Homo sapiens ribosomal protein S27
           protein.
          Length = 84

 Score = 72.5 bits (170), Expect = 2e-12
 Identities = 40/86 (46%), Positives = 47/86 (54%)
 Frame = +1

Query: 94  MPRRKXXXAXAPCDRRGGEHKL*AGIVPHPNSXXMDVKCPGRDKXTTXSRHXQRVVVSXG 273
           MP  K     +P + +  +HK    +V  PNS  MDVKCPG  K TT   H Q VV+  G
Sbjct: 1   MPLAKDLLHPSPEEEKR-KHKK-KRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVG 58

Query: 274 CPTSPXQPTGGRATFXEGCXXXRKQH 351
           C T   QPTGG+A   EGC   RKQH
Sbjct: 59  CSTVLCQPTGGKARLTEGCSFRRKQH 84


>L19739-1|AAA59867.1|   84|Homo sapiens metallopanstimulin protein.
          Length = 84

 Score = 72.5 bits (170), Expect = 2e-12
 Identities = 40/86 (46%), Positives = 47/86 (54%)
 Frame = +1

Query: 94  MPRRKXXXAXAPCDRRGGEHKL*AGIVPHPNSXXMDVKCPGRDKXTTXSRHXQRVVVSXG 273
           MP  K     +P + +  +HK    +V  PNS  MDVKCPG  K TT   H Q VV+  G
Sbjct: 1   MPLAKDLLHPSPEEEKR-KHKK-KRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVG 58

Query: 274 CPTSPXQPTGGRATFXEGCXXXRKQH 351
           C T   QPTGG+A   EGC   RKQH
Sbjct: 59  CSTVLCQPTGGKARLTEGCSFRRKQH 84


>BC070219-1|AAH70219.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score = 72.5 bits (170), Expect = 2e-12
 Identities = 40/86 (46%), Positives = 47/86 (54%)
 Frame = +1

Query: 94  MPRRKXXXAXAPCDRRGGEHKL*AGIVPHPNSXXMDVKCPGRDKXTTXSRHXQRVVVSXG 273
           MP  K     +P + +  +HK    +V  PNS  MDVKCPG  K TT   H Q VV+  G
Sbjct: 1   MPLAKDLLHPSPEEEKR-KHKK-KRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVG 58

Query: 274 CPTSPXQPTGGRATFXEGCXXXRKQH 351
           C T   QPTGG+A   EGC   RKQH
Sbjct: 59  CSTVLCQPTGGKARLTEGCSFRRKQH 84


>BC002658-1|AAH02658.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score = 72.5 bits (170), Expect = 2e-12
 Identities = 40/86 (46%), Positives = 47/86 (54%)
 Frame = +1

Query: 94  MPRRKXXXAXAPCDRRGGEHKL*AGIVPHPNSXXMDVKCPGRDKXTTXSRHXQRVVVSXG 273
           MP  K     +P + +  +HK    +V  PNS  MDVKCPG  K TT   H Q VV+  G
Sbjct: 1   MPLAKDLLHPSPEEEKR-KHKK-KRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVG 58

Query: 274 CPTSPXQPTGGRATFXEGCXXXRKQH 351
           C T   QPTGG+A   EGC   RKQH
Sbjct: 59  CSTVLCQPTGGKARLTEGCSFRRKQH 84


>AL358472-19|CAI14033.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score = 72.5 bits (170), Expect = 2e-12
 Identities = 40/86 (46%), Positives = 47/86 (54%)
 Frame = +1

Query: 94  MPRRKXXXAXAPCDRRGGEHKL*AGIVPHPNSXXMDVKCPGRDKXTTXSRHXQRVVVSXG 273
           MP  K     +P + +  +HK    +V  PNS  MDVKCPG  K TT   H Q VV+  G
Sbjct: 1   MPLAKDLLHPSPEEEKR-KHKK-KRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVG 58

Query: 274 CPTSPXQPTGGRATFXEGCXXXRKQH 351
           C T   QPTGG+A   EGC   RKQH
Sbjct: 59  CSTVLCQPTGGKARLTEGCSFRRKQH 84


>AB061845-1|BAB79483.1|   84|Homo sapiens ribosomal protein S27
           protein.
          Length = 84

 Score = 72.5 bits (170), Expect = 2e-12
 Identities = 40/86 (46%), Positives = 47/86 (54%)
 Frame = +1

Query: 94  MPRRKXXXAXAPCDRRGGEHKL*AGIVPHPNSXXMDVKCPGRDKXTTXSRHXQRVVVSXG 273
           MP  K     +P + +  +HK    +V  PNS  MDVKCPG  K TT   H Q VV+  G
Sbjct: 1   MPLAKDLLHPSPEEEKR-KHKK-KRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVG 58

Query: 274 CPTSPXQPTGGRATFXEGCXXXRKQH 351
           C T   QPTGG+A   EGC   RKQH
Sbjct: 59  CSTVLCQPTGGKARLTEGCSFRRKQH 84


>BC003667-1|AAH03667.1|   84|Homo sapiens ribosomal protein S27-like
           protein.
          Length = 84

 Score = 72.1 bits (169), Expect = 3e-12
 Identities = 34/61 (55%), Positives = 37/61 (60%)
 Frame = +1

Query: 169 IVPHPNSXXMDVKCPGRDKXTTXSRHXQRVVVSXGCPTSPXQPTGGRATFXEGCXXXRKQ 348
           +V  PNS  MDVKCPG  K TT   H Q VV+  GC T   QPTGG+A   EGC   RKQ
Sbjct: 24  LVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRKQ 83

Query: 349 H 351
           H
Sbjct: 84  H 84


>BC047648-1|AAH47648.1|  113|Homo sapiens RPS27L protein protein.
          Length = 113

 Score = 60.5 bits (140), Expect = 9e-09
 Identities = 29/53 (54%), Positives = 32/53 (60%)
 Frame = +1

Query: 169 IVPHPNSXXMDVKCPGRDKXTTXSRHXQRVVVSXGCPTSPXQPTGGRATFXEG 327
           +V  PNS  MDVKCPG  K TT   H Q VV+  GC T   QPTGG+A   EG
Sbjct: 40  LVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEG 92


>AB007162-1|BAA25825.1|   69|Homo sapiens ribosomal protein S27
           protein.
          Length = 69

 Score = 56.8 bits (131), Expect = 1e-07
 Identities = 27/48 (56%), Positives = 30/48 (62%)
 Frame = +1

Query: 169 IVPHPNSXXMDVKCPGRDKXTTXSRHXQRVVVSXGCPTSPXQPTGGRA 312
           +V  PNS  MDVKCPG  K TT   H Q VV+  GC T   QPTGG+A
Sbjct: 19  LVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKA 66


>AB058759-1|BAB47485.1| 1134|Homo sapiens KIAA1856 protein protein.
          Length = 1134

 Score = 36.7 bits (81), Expect = 0.13
 Identities = 22/66 (33%), Positives = 23/66 (34%)
 Frame = +1

Query: 754  PAXXRXPPPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXX 933
            P+  R PPPP    P      P   PPP       R    PP P    HP     P    
Sbjct: 949  PSEARAPPPPPPPPPHPPLPPPPLPPPP----LPLRLPPLPPPPLPRPHPPPP--PPLPP 1002

Query: 934  XTPPPQ 951
              PPPQ
Sbjct: 1003 LLPPPQ 1008


>X67337-1|CAA47752.1|  551|Homo sapiens Human pre-mRNA cleavage
           factor I 68 kDa subunit protein.
          Length = 551

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 18/61 (29%), Positives = 18/61 (29%)
 Frame = +1

Query: 775 PPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXXXTPPPQX 954
           P P    P      P   PPP   G        PP P     P  T  P      PPP  
Sbjct: 291 PLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGA 350

Query: 955 P 957
           P
Sbjct: 351 P 351


>X67336-1|CAA47751.1|  551|Homo sapiens HPBRII-7 protein.
          Length = 551

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 18/61 (29%), Positives = 18/61 (29%)
 Frame = +1

Query: 775 PPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXXXTPPPQX 954
           P P    P      P   PPP   G        PP P     P  T  P      PPP  
Sbjct: 291 PLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGA 350

Query: 955 P 957
           P
Sbjct: 351 P 351


>K03208-1|AAA60189.1|  251|Homo sapiens PRB2 protein.
          Length = 251

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 30/133 (22%), Positives = 33/133 (24%), Gaps = 3/133 (2%)
 Frame = +1

Query: 568 PXXXXAPQKXPPAXXX---APPXPXRXXGXPAQXHNTXTXARXXXXXXXXXXXXXXXXXX 738
           P     PQ  PP        PP P +  G P Q  N    AR                  
Sbjct: 30  PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQ 89

Query: 739 XXXXXPAXXRXPPPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXG 918
                P   + PPP             +   PP   G   R    P  P     P    G
Sbjct: 90  GPPPPPGKPQGPPPQGDNKSQGPPPPGKPQGPPPQGGSKSRSSRSP--PGKPQGPPPQGG 147

Query: 919 PXXXXXTPPPQXP 957
                  PPP  P
Sbjct: 148 NQPQGPPPPPGKP 160


>BC095481-1|AAH95481.1|  591|Homo sapiens enabled homolog
           (Drosophila) protein.
          Length = 591

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 20/62 (32%), Positives = 20/62 (32%)
 Frame = +1

Query: 772 PPPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXXXTPPPQ 951
           PPPP    P   Q      PPPG           PP P T   P     P      PPP 
Sbjct: 313 PPPPPPLPPGPAQASVALPPPPG-------PPPPPPLPSTGPPPPPPPPPLPNQVPPPPP 365

Query: 952 XP 957
            P
Sbjct: 366 PP 367


>BC065238-1|AAH65238.1|  527|Homo sapiens ENAH protein protein.
          Length = 527

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 20/62 (32%), Positives = 20/62 (32%)
 Frame = +1

Query: 772 PPPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXXXTPPPQ 951
           PPPP    P   Q      PPPG           PP P T   P     P      PPP 
Sbjct: 270 PPPPPPLPPGPAQASVALPPPPG-------PPPPPPLPSTGPPPPPPPPPLPNQVPPPPP 322

Query: 952 XP 957
            P
Sbjct: 323 PP 324


>BC005000-1|AAH05000.1|  478|Homo sapiens CPSF6 protein protein.
          Length = 478

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 18/61 (29%), Positives = 18/61 (29%)
 Frame = +1

Query: 775 PPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXXXTPPPQX 954
           P P    P      P   PPP   G        PP P     P  T  P      PPP  
Sbjct: 218 PLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGA 277

Query: 955 P 957
           P
Sbjct: 278 P 278


>BC000714-1|AAH00714.1|  588|Homo sapiens CPSF6 protein protein.
          Length = 588

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 18/61 (29%), Positives = 18/61 (29%)
 Frame = +1

Query: 775 PPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXXXTPPPQX 954
           P P    P      P   PPP   G        PP P     P  T  P      PPP  
Sbjct: 328 PLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGA 387

Query: 955 P 957
           P
Sbjct: 388 P 388


>AY345143-1|AAR04685.1|  570|Homo sapiens MENA protein.
          Length = 570

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 20/62 (32%), Positives = 20/62 (32%)
 Frame = +1

Query: 772 PPPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXXXTPPPQ 951
           PPPP    P   Q      PPPG           PP P T   P     P      PPP 
Sbjct: 313 PPPPPPLPPGPAQASVALPPPPG-------PPPPPPLPSTGPPPPPPPPPLPNQVPPPPP 365

Query: 952 XP 957
            P
Sbjct: 366 PP 367


>AL591380-2|CAH71476.1|  570|Homo sapiens enabled homolog
           (Drosophila) protein.
          Length = 570

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 20/62 (32%), Positives = 20/62 (32%)
 Frame = +1

Query: 772 PPPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXXXTPPPQ 951
           PPPP    P   Q      PPPG           PP P T   P     P      PPP 
Sbjct: 313 PPPPPPLPPGPAQASVALPPPPG-------PPPPPPLPSTGPPPPPPPPPLPNQVPPPPP 365

Query: 952 XP 957
            P
Sbjct: 366 PP 367


>AL591380-1|CAH71475.1|  817|Homo sapiens enabled homolog
           (Drosophila) protein.
          Length = 817

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 20/62 (32%), Positives = 20/62 (32%)
 Frame = +1

Query: 772 PPPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXXXTPPPQ 951
           PPPP    P   Q      PPPG           PP P T   P     P      PPP 
Sbjct: 560 PPPPPPLPPGPAQASVALPPPPG-------PPPPPPLPSTGPPPPPPPPPLPNQVPPPPP 612

Query: 952 XP 957
            P
Sbjct: 613 PP 614


>AL356216-3|CAI22019.1|  570|Homo sapiens enabled homolog
           (Drosophila) protein.
          Length = 570

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 20/62 (32%), Positives = 20/62 (32%)
 Frame = +1

Query: 772 PPPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXXXTPPPQ 951
           PPPP    P   Q      PPPG           PP P T   P     P      PPP 
Sbjct: 313 PPPPPPLPPGPAQASVALPPPPG-------PPPPPPLPSTGPPPPPPPPPLPNQVPPPPP 365

Query: 952 XP 957
            P
Sbjct: 366 PP 367


>AL356216-2|CAI22020.1|  817|Homo sapiens enabled homolog
           (Drosophila) protein.
          Length = 817

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 20/62 (32%), Positives = 20/62 (32%)
 Frame = +1

Query: 772 PPPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXXXTPPPQ 951
           PPPP    P   Q      PPPG           PP P T   P     P      PPP 
Sbjct: 560 PPPPPPLPPGPAQASVALPPPPG-------PPPPPPLPSTGPPPPPPPPPLPNQVPPPPP 612

Query: 952 XP 957
            P
Sbjct: 613 PP 614


>AK223568-1|BAD97288.1|  551|Homo sapiens cleavage and
           polyadenylation specific factor 6, 68 kD subunit variant
           protein.
          Length = 551

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 18/61 (29%), Positives = 18/61 (29%)
 Frame = +1

Query: 775 PPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXXXTPPPQX 954
           P P    P      P   PPP   G        PP P     P  T  P      PPP  
Sbjct: 291 PLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGA 350

Query: 955 P 957
           P
Sbjct: 351 P 351


>AK096246-1|BAC04736.1|  467|Homo sapiens protein ( Homo sapiens
           cDNA FLJ38927 fis, clone NT2NE2012505, highly similar to
           Gallus gallus mRNA for avena. ).
          Length = 467

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 20/62 (32%), Positives = 20/62 (32%)
 Frame = +1

Query: 772 PPPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXXXTPPPQ 951
           PPPP    P   Q      PPPG           PP P T   P     P      PPP 
Sbjct: 210 PPPPPPLPPGPAQASVALPPPPG-------PPPPPPLPSTGPPPPPPPPPLPNQVPPPPP 262

Query: 952 XP 957
            P
Sbjct: 263 PP 264


>AF519769-1|AAQ08487.1|  591|Homo sapiens mena protein protein.
          Length = 591

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 20/62 (32%), Positives = 20/62 (32%)
 Frame = +1

Query: 772 PPPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXXXTPPPQ 951
           PPPP    P   Q      PPPG           PP P T   P     P      PPP 
Sbjct: 313 PPPPPPLPPGPAQASVALPPPPG-------PPPPPPLPSTGPPPPPPPPPLPNQVPPPPP 365

Query: 952 XP 957
            P
Sbjct: 366 PP 367


>U19927-1|AAC50140.1|  502|Homo sapiens WAS protein.
          Length = 502

 Score = 32.7 bits (71), Expect = 2.0
 Identities = 23/68 (33%), Positives = 24/68 (35%)
 Frame = +1

Query: 754 PAXXRXPPPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXX 933
           P     PPPP    P   +  P   PPPGA G        PP P     P    GP    
Sbjct: 362 PGRGGPPPPPP---PATGRSGPLPPPPPGAGGPP----MPPPPPPPPPPPSSGNGP---- 410

Query: 934 XTPPPQXP 957
             PPP  P
Sbjct: 411 -APPPLPP 417


>U12707-1|AAA62663.1|  502|Homo sapiens Wiskott-Aldrich syndrome
           protein protein.
          Length = 502

 Score = 32.7 bits (71), Expect = 2.0
 Identities = 23/68 (33%), Positives = 24/68 (35%)
 Frame = +1

Query: 754 PAXXRXPPPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXX 933
           P     PPPP    P   +  P   PPPGA G        PP P     P    GP    
Sbjct: 362 PGRGGPPPPPP---PATGRSGPLPPPPPGAGGPP----MPPPPPPPPPPPSSGNGP---- 410

Query: 934 XTPPPQXP 957
             PPP  P
Sbjct: 411 -APPPLPP 417


>BC012738-1|AAH12738.1|  502|Homo sapiens Wiskott-Aldrich syndrome
           (eczema-thrombocytopenia) protein.
          Length = 502

 Score = 32.7 bits (71), Expect = 2.0
 Identities = 23/68 (33%), Positives = 24/68 (35%)
 Frame = +1

Query: 754 PAXXRXPPPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXX 933
           P     PPPP    P   +  P   PPPGA G        PP P     P    GP    
Sbjct: 362 PGRGGPPPPPP---PATGRSGPLPPPPPGAGGPP----MPPPPPPPPPPPSSGNGP---- 410

Query: 934 XTPPPQXP 957
             PPP  P
Sbjct: 411 -APPPLPP 417


>BC002961-1|AAH02961.1|  514|Homo sapiens WAS protein protein.
          Length = 514

 Score = 32.7 bits (71), Expect = 2.0
 Identities = 23/68 (33%), Positives = 24/68 (35%)
 Frame = +1

Query: 754 PAXXRXPPPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXX 933
           P     PPPP    P   +  P   PPPGA G        PP P     P    GP    
Sbjct: 374 PGRGGPPPPPP---PATGRSGPLPPPPPGAGGPP----MPPPPPPPPPPPSSGNGP---- 422

Query: 934 XTPPPQXP 957
             PPP  P
Sbjct: 423 -APPPLPP 429


>AF115549-1|AAD26691.1|  502|Homo sapiens Wiskott-Aldrich Syndrome
           protein protein.
          Length = 502

 Score = 32.7 bits (71), Expect = 2.0
 Identities = 23/68 (33%), Positives = 24/68 (35%)
 Frame = +1

Query: 754 PAXXRXPPPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXX 933
           P     PPPP    P   +  P   PPPGA G        PP P     P    GP    
Sbjct: 362 PGRGGPPPPPP---PATGRSGPLPPPPPGAGGPP----MPPPPPPPPPPPSSGNGP---- 410

Query: 934 XTPPPQXP 957
             PPP  P
Sbjct: 411 -APPPLPP 417


>BC073988-1|AAH73988.1|  682|Homo sapiens FMNL1 protein protein.
          Length = 682

 Score = 32.3 bits (70), Expect = 2.7
 Identities = 22/75 (29%), Positives = 24/75 (32%), Gaps = 7/75 (9%)
 Frame = +1

Query: 754 PAXXRXPPPPXXXXPXXXQXXP----QTXPPPGANGXXXRXRXX---PPXPXTTXHPXXT 912
           P     PPPP    P   +  P    Q  P PG+             PP P     P  T
Sbjct: 120 PGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPPPPPPPPPGT 179

Query: 913 XGPXXXXXTPPPQXP 957
            GP      PPP  P
Sbjct: 180 DGPVPPPPPPPPPPP 194


>BC044636-1|AAH44636.1|  520|Homo sapiens YLPM1 protein protein.
          Length = 520

 Score = 32.3 bits (70), Expect = 2.7
 Identities = 18/68 (26%), Positives = 21/68 (30%)
 Frame = +1

Query: 754 PAXXRXPPPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXX 933
           P+     PPP           P   PPP  +         PP   +T  P     P    
Sbjct: 395 PSLPTSVPPPGMPPSLSSAGPPPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPLPPLSS 454

Query: 934 XTPPPQXP 957
            TPPP  P
Sbjct: 455 ATPPPGIP 462


>BC023532-1|AAH23532.1|  641|Homo sapiens WW domain binding protein
           11 protein.
          Length = 641

 Score = 32.3 bits (70), Expect = 2.7
 Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
 Frame = +1

Query: 766 RXPPPPXXXXPXXXQXXPQTXPPPGANG-XXXRXRXXPPXPXTTXHPXXTXGPXXXXXT- 939
           R P PP    P      P    PPG  G      R  PP P     P    GP       
Sbjct: 422 RPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPG 481

Query: 940 PPPQXP 957
           PPP+ P
Sbjct: 482 PPPRGP 487


>BC016441-1|AAH16441.2|  400|Homo sapiens WBP11 protein protein.
          Length = 400

 Score = 32.3 bits (70), Expect = 2.7
 Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
 Frame = +1

Query: 766 RXPPPPXXXXPXXXQXXPQTXPPPGANG-XXXRXRXXPPXPXTTXHPXXTXGPXXXXXT- 939
           R P PP    P      P    PPG  G      R  PP P     P    GP       
Sbjct: 181 RPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPG 240

Query: 940 PPPQXP 957
           PPP+ P
Sbjct: 241 PPPRGP 246


>BC001621-1|AAH01621.1|  641|Homo sapiens WW domain binding protein
           11 protein.
          Length = 641

 Score = 32.3 bits (70), Expect = 2.7
 Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
 Frame = +1

Query: 766 RXPPPPXXXXPXXXQXXPQTXPPPGANG-XXXRXRXXPPXPXTTXHPXXTXGPXXXXXT- 939
           R P PP    P      P    PPG  G      R  PP P     P    GP       
Sbjct: 422 RPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPG 481

Query: 940 PPPQXP 957
           PPP+ P
Sbjct: 482 PPPRGP 487


>AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.
          Length = 1100

 Score = 32.3 bits (70), Expect = 2.7
 Identities = 22/75 (29%), Positives = 24/75 (32%), Gaps = 7/75 (9%)
 Frame = +1

Query: 754 PAXXRXPPPPXXXXPXXXQXXP----QTXPPPGANGXXXRXRXX---PPXPXTTXHPXXT 912
           P     PPPP    P   +  P    Q  P PG+             PP P     P  T
Sbjct: 538 PGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPPPPPPPPPGT 597

Query: 913 XGPXXXXXTPPPQXP 957
            GP      PPP  P
Sbjct: 598 DGPVPPPPPPPPPPP 612


>AK090435-1|BAC03416.1| 1766|Homo sapiens FLJ00353 protein protein.
          Length = 1766

 Score = 32.3 bits (70), Expect = 2.7
 Identities = 18/68 (26%), Positives = 21/68 (30%)
 Frame = +1

Query: 754 PAXXRXPPPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXX 933
           P+     PPP           P   PPP  +         PP   +T  P     P    
Sbjct: 193 PSLPTSVPPPGMPPSLSSAGPPPVLPPPSLSSAGPPPVLPPPSLSSTAPPPVMPLPPLSS 252

Query: 934 XTPPPQXP 957
            TPPP  P
Sbjct: 253 ATPPPGIP 260


>AF432213-1|AAL99920.1|  991|Homo sapiens CLL-associated antigen
           KW-13 protein.
          Length = 991

 Score = 32.3 bits (70), Expect = 2.7
 Identities = 22/75 (29%), Positives = 24/75 (32%), Gaps = 7/75 (9%)
 Frame = +1

Query: 754 PAXXRXPPPPXXXXPXXXQXXP----QTXPPPGANGXXXRXRXX---PPXPXTTXHPXXT 912
           P     PPPP    P   +  P    Q  P PG+             PP P     P  T
Sbjct: 429 PGAAPPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLPPPPPPPPPPPGT 488

Query: 913 XGPXXXXXTPPPQXP 957
            GP      PPP  P
Sbjct: 489 DGPVPPPPPPPPPPP 503


>AF118023-1|AAD30425.1|  641|Homo sapiens SH3 domain-binding protein
           SNP70 protein.
          Length = 641

 Score = 32.3 bits (70), Expect = 2.7
 Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
 Frame = +1

Query: 766 RXPPPPXXXXPXXXQXXPQTXPPPGANG-XXXRXRXXPPXPXTTXHPXXTXGPXXXXXT- 939
           R P PP    P      P    PPG  G      R  PP P     P    GP       
Sbjct: 422 RPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPG 481

Query: 940 PPPQXP 957
           PPP+ P
Sbjct: 482 PPPRGP 487


>AB029309-1|BAA88410.1|  641|Homo sapiens Npw38-binding protein
           NpwBP protein.
          Length = 641

 Score = 32.3 bits (70), Expect = 2.7
 Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
 Frame = +1

Query: 766 RXPPPPXXXXPXXXQXXPQTXPPPGANG-XXXRXRXXPPXPXTTXHPXXTXGPXXXXXT- 939
           R P PP    P      P    PPG  G      R  PP P     P    GP       
Sbjct: 422 RPPGPPTGLPPGPPPGAPPFLRPPGMPGLRGPLPRLLPPGPPPGRPPGPPPGPPPGLPPG 481

Query: 940 PPPQXP 957
           PPP+ P
Sbjct: 482 PPPRGP 487


>X07704-1|CAA30542.1|  234|Homo sapiens Po protein protein.
          Length = 234

 Score = 31.9 bits (69), Expect = 3.6
 Identities = 26/116 (22%), Positives = 30/116 (25%), Gaps = 3/116 (2%)
 Frame = +1

Query: 619 PPXPXRXXGXPAQXHNTXTXARXXXXXXXXXXXXXXXXXXXXXXXPAXXRXPPPPXXXX- 795
           PP P +  G P Q  N                             P     PPP      
Sbjct: 17  PPPPGKPQGPPPQGGNQSQGPPPHPGKPERPPPQGGNQSQGPPPHPGKPERPPPQGGNQS 76

Query: 796 --PXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXXXTPPPQXP 957
             P      P+  PP G N    + +  PP P     P    G       PPP  P
Sbjct: 77  QGPPPTPGKPEGPPPQGGN----QSQGPPPHPGKPERPPPQGGNQSHRPPPPPGKP 128


>L21990-1|AAA60301.1|  464|Homo sapiens spiceosomal protein protein.
          Length = 464

 Score = 31.9 bits (69), Expect = 3.6
 Identities = 20/65 (30%), Positives = 23/65 (35%)
 Frame = +1

Query: 754 PAXXRXPPPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXX 933
           P   + PPPP           P++ PPP   G        PP P T   P    GP    
Sbjct: 227 PPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGL-----PLPPMPPTGPAP---SGPPGPP 278

Query: 934 XTPPP 948
             PPP
Sbjct: 279 QLPPP 283


>BC015804-1|AAH15804.1|  481|Homo sapiens SF3A2 protein protein.
          Length = 481

 Score = 31.9 bits (69), Expect = 3.6
 Identities = 20/65 (30%), Positives = 23/65 (35%)
 Frame = +1

Query: 754 PAXXRXPPPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXX 933
           P   + PPPP           P++ PPP   G        PP P T   P    GP    
Sbjct: 227 PPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGL-----PLPPMPPTGPAP---SGPPGPP 278

Query: 934 XTPPP 948
             PPP
Sbjct: 279 QLPPP 283


>BC009903-1|AAH09903.1|  464|Homo sapiens splicing factor 3a,
           subunit 2, 66kDa protein.
          Length = 464

 Score = 31.9 bits (69), Expect = 3.6
 Identities = 20/65 (30%), Positives = 23/65 (35%)
 Frame = +1

Query: 754 PAXXRXPPPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXX 933
           P   + PPPP           P++ PPP   G        PP P T   P    GP    
Sbjct: 227 PPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGL-----PLPPMPPTGPAP---SGPPGPP 278

Query: 934 XTPPP 948
             PPP
Sbjct: 279 QLPPP 283


>BC004434-1|AAH04434.1|  464|Homo sapiens splicing factor 3a,
           subunit 2, 66kDa protein.
          Length = 464

 Score = 31.9 bits (69), Expect = 3.6
 Identities = 20/65 (30%), Positives = 23/65 (35%)
 Frame = +1

Query: 754 PAXXRXPPPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXX 933
           P   + PPPP           P++ PPP   G        PP P T   P    GP    
Sbjct: 227 PPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGL-----PLPPMPPTGPAP---SGPPGPP 278

Query: 934 XTPPP 948
             PPP
Sbjct: 279 QLPPP 283


>AC005263-1|AAC25613.1|  464|Homo sapiens SP62_HUMAN protein.
          Length = 464

 Score = 31.9 bits (69), Expect = 3.6
 Identities = 20/65 (30%), Positives = 23/65 (35%)
 Frame = +1

Query: 754 PAXXRXPPPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXX 933
           P   + PPPP           P++ PPP   G        PP P T   P    GP    
Sbjct: 227 PPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGL-----PLPPMPPTGPAP---SGPPGPP 278

Query: 934 XTPPP 948
             PPP
Sbjct: 279 QLPPP 283


>BC038446-1|AAH38446.1|  673|Homo sapiens SF1 protein protein.
          Length = 673

 Score = 31.5 bits (68), Expect = 4.7
 Identities = 13/38 (34%), Positives = 14/38 (36%)
 Frame = +1

Query: 772 PPPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXP 885
           PPPP    P   Q  P   PPP         +  PP P
Sbjct: 69  PPPPPPPPPPPPQQPPPPPPPPSPGASYPPPQPPPPPP 106



 Score = 30.7 bits (66), Expect = 8.2
 Identities = 14/44 (31%), Positives = 16/44 (36%)
 Frame = +1

Query: 754 PAXXRXPPPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXP 885
           P   + PPPP    P      PQ  PPP         +  PP P
Sbjct: 78  PPPQQPPPPPPPPSPGASYPPPQPPPPPPLYQRVSPPQPPPPQP 121


>BC034003-1|AAH34003.1|  600|Homo sapiens PRR12 protein protein.
          Length = 600

 Score = 30.7 bits (66), Expect = 8.2
 Identities = 17/68 (25%), Positives = 19/68 (27%)
 Frame = +1

Query: 754 PAXXRXPPPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXX 933
           P      PPP        Q  P   PPP             P P +   P     P    
Sbjct: 86  PPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAM 145

Query: 934 XTPPPQXP 957
            +PPP  P
Sbjct: 146 PSPPPPPP 153


>AK091050-1|BAC03574.1|  723|Homo sapiens protein ( Homo sapiens
           cDNA FLJ33731 fis, clone BRAWH2017685, moderately
           similar to Mus musculus mRNA for nuclear protein ZAP. ).
          Length = 723

 Score = 30.7 bits (66), Expect = 8.2
 Identities = 18/68 (26%), Positives = 20/68 (29%)
 Frame = +1

Query: 754 PAXXRXPPPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXX 933
           P+     PPP           P   PPP            PP   +T  P     P    
Sbjct: 136 PSLPTSVPPPGMPPSLSSAGPPPVLPPPSLFSAGPPPVLPPPSLSSTAPPPVMPLPPLSS 195

Query: 934 XTPPPQXP 957
            TPPP  P
Sbjct: 196 ATPPPGIP 203


>AB033031-1|BAA86519.1| 1217|Homo sapiens KIAA1205 protein protein.
          Length = 1217

 Score = 30.7 bits (66), Expect = 8.2
 Identities = 17/68 (25%), Positives = 19/68 (27%)
 Frame = +1

Query: 754 PAXXRXPPPPXXXXPXXXQXXPQTXPPPGANGXXXRXRXXPPXPXTTXHPXXTXGPXXXX 933
           P      PPP        Q  P   PPP             P P +   P     P    
Sbjct: 631 PPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAM 690

Query: 934 XTPPPQXP 957
            +PPP  P
Sbjct: 691 PSPPPPPP 698


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,878,268
Number of Sequences: 237096
Number of extensions: 1706308
Number of successful extensions: 6852
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 3358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6169
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12714176638
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -