Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_P10
         (928 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC017386-1|AAH17386.1|  157|Homo sapiens ribosomal protein S19 p...    95   2e-19
M81757-1|AAA89070.1|  145|Homo sapiens S19 ribosomal protein pro...    91   5e-18
BC018616-1|AAH18616.1|  145|Homo sapiens ribosomal protein S19 p...    91   5e-18
BC007615-1|AAH07615.1|  145|Homo sapiens ribosomal protein S19 p...    91   5e-18
BC000023-1|AAH00023.1|  145|Homo sapiens ribosomal protein S19 p...    91   5e-18
AF092907-1|AAD13668.1|  145|Homo sapiens ribosomal protein S19 p...    91   5e-18

>BC017386-1|AAH17386.1|  157|Homo sapiens ribosomal protein S19
           protein.
          Length = 157

 Score = 95.5 bits (227), Expect = 2e-19
 Identities = 50/107 (46%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
 Frame = +2

Query: 62  GCQHKARCVP-VTVXDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDW 238
           G Q   R VP VTV DV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +W
Sbjct: 5   GWQRGGRTVPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENW 64

Query: 239 FYVRCAAILRHIYIRSPVGVKTVXRSLVGANVM-ELHLHISAGHQAV 376
           FY R A+  RH+Y+R   GV ++ +   G      +  H S G ++V
Sbjct: 65  FYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSV 111



 Score = 84.6 bits (200), Expect = 5e-16
 Identities = 39/55 (70%), Positives = 46/55 (83%)
 Frame = +1

Query: 310 KIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDL 474
           KI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RDL
Sbjct: 89  KIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDL 143


>M81757-1|AAA89070.1|  145|Homo sapiens S19 ribosomal protein
           protein.
          Length = 145

 Score = 91.1 bits (216), Expect = 5e-18
 Identities = 45/96 (46%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
 Frame = +2

Query: 92  VTVXDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 271
           VTV DV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+  RH
Sbjct: 4   VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 63

Query: 272 IYIRSPVGVKTVXRSLVGANVM-ELHLHISAGHQAV 376
           +Y+R   GV ++ +   G      +  H S G ++V
Sbjct: 64  LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSV 99



 Score = 84.6 bits (200), Expect = 5e-16
 Identities = 39/55 (70%), Positives = 46/55 (83%)
 Frame = +1

Query: 310 KIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDL 474
           KI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RDL
Sbjct: 77  KIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDL 131


>BC018616-1|AAH18616.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score = 91.1 bits (216), Expect = 5e-18
 Identities = 45/96 (46%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
 Frame = +2

Query: 92  VTVXDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 271
           VTV DV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+  RH
Sbjct: 4   VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 63

Query: 272 IYIRSPVGVKTVXRSLVGANVM-ELHLHISAGHQAV 376
           +Y+R   GV ++ +   G      +  H S G ++V
Sbjct: 64  LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSV 99



 Score = 84.6 bits (200), Expect = 5e-16
 Identities = 39/55 (70%), Positives = 46/55 (83%)
 Frame = +1

Query: 310 KIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDL 474
           KI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RDL
Sbjct: 77  KIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDL 131


>BC007615-1|AAH07615.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score = 91.1 bits (216), Expect = 5e-18
 Identities = 45/96 (46%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
 Frame = +2

Query: 92  VTVXDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 271
           VTV DV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+  RH
Sbjct: 4   VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 63

Query: 272 IYIRSPVGVKTVXRSLVGANVM-ELHLHISAGHQAV 376
           +Y+R   GV ++ +   G      +  H S G ++V
Sbjct: 64  LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSV 99



 Score = 84.6 bits (200), Expect = 5e-16
 Identities = 39/55 (70%), Positives = 46/55 (83%)
 Frame = +1

Query: 310 KIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDL 474
           KI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RDL
Sbjct: 77  KIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDL 131


>BC000023-1|AAH00023.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score = 91.1 bits (216), Expect = 5e-18
 Identities = 45/96 (46%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
 Frame = +2

Query: 92  VTVXDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 271
           VTV DV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+  RH
Sbjct: 4   VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 63

Query: 272 IYIRSPVGVKTVXRSLVGANVM-ELHLHISAGHQAV 376
           +Y+R   GV ++ +   G      +  H S G ++V
Sbjct: 64  LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSV 99



 Score = 84.6 bits (200), Expect = 5e-16
 Identities = 39/55 (70%), Positives = 46/55 (83%)
 Frame = +1

Query: 310 KIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDL 474
           KI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RDL
Sbjct: 77  KIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDL 131


>AF092907-1|AAD13668.1|  145|Homo sapiens ribosomal protein S19
           protein.
          Length = 145

 Score = 91.1 bits (216), Expect = 5e-18
 Identities = 45/96 (46%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
 Frame = +2

Query: 92  VTVXDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 271
           VTV DV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+  RH
Sbjct: 4   VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 63

Query: 272 IYIRSPVGVKTVXRSLVGANVM-ELHLHISAGHQAV 376
           +Y+R   GV ++ +   G      +  H S G ++V
Sbjct: 64  LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSV 99



 Score = 84.6 bits (200), Expect = 5e-16
 Identities = 39/55 (70%), Positives = 46/55 (83%)
 Frame = +1

Query: 310 KIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQDGGRILTTQGRRDL 474
           KI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK QDGGR LT QG+RDL
Sbjct: 77  KIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDL 131


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,238,540
Number of Sequences: 237096
Number of extensions: 1579042
Number of successful extensions: 2989
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2989
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12103451996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)