Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_P09
         (1072 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0072 + 13218669-13218706,13218715-13218781,13220400-132204...    29   8.3  

>12_02_0072 +
           13218669-13218706,13218715-13218781,13220400-13220471,
           13222107-13222182,13222309-13222943
          Length = 295

 Score = 28.7 bits (61), Expect = 8.3
 Identities = 14/35 (40%), Positives = 16/35 (45%)
 Frame = +1

Query: 376 GGGGXXKXXXKKGEKXRXKKGXXXGKKKKXGXXGG 480
           GGGG  K     G+K     G   G+ KK G  GG
Sbjct: 147 GGGGDGKKEGGDGKKEEGGDGKKEGEGKKEGDGGG 181


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.301    0.128    0.342 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,959,243
Number of Sequences: 37544
Number of extensions: 84759
Number of successful extensions: 125
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 99
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3187874508
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 17 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.6 bits)