Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_P06
         (929 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    23   3.9  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    23   3.9  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   5.2  
AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced prot...    23   5.2  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    22   6.9  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   6.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   9.1  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 161 LRTGCGHPSRGGGLPSAKQ 217
           L + C  PSRG  +PS+++
Sbjct: 12  LLSSCTRPSRGNAVPSSQR 30


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +2

Query: 161 LRTGCGHPSRGGGLPSAKQ 217
           L + C  PSRG  +PS+++
Sbjct: 12  LLSSCTRPSRGNAVPSSQR 30


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 14/40 (35%), Positives = 21/40 (52%)
 Frame = +1

Query: 664 SPQDTSLVPERSFITSSSLWYRTPSPTCPSTLRSLLRAPA 783
           SP  TS +  R +  + +L    PSP  PST   +L+ P+
Sbjct: 417 SPDRTSPMEYRLY--NPALIQSQPSPQYPSTSSHILQQPS 454


>AB264333-1|BAF44088.1|   36|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 36

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = -2

Query: 589 MCFPYNLCRIPRDLSPTQITL 527
           M  PY++ ++P  LSP   T+
Sbjct: 1   MSSPYHVAQLPHHLSPNMPTM 21


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +3

Query: 726 SYAQSDLPLYTKKSI--ESASKLTAYDSLDSDVLQSYTEFSLASLLXYAPE 872
           S ++S L  Y  K +  +  +K T++DS   D +QS  E   + +  YAP+
Sbjct: 4   SDSKSLLKKYLSKDVFDQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPD 54


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 6.9
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
 Frame = +3

Query: 726 SYAQSDLPLYTKKSI--ESASKLTAYDSLDSDVLQSYTEFSLASLLXYAPE 872
           S ++S L  Y  K +  +  +K T++DS   D +QS  E   + +  YAP+
Sbjct: 20  SDSKSLLKKYLSKDVFDQLKTKKTSFDSTLLDCIQSGIENLDSGVGIYAPD 70


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 9.1
 Identities = 12/47 (25%), Positives = 23/47 (48%)
 Frame = -1

Query: 482  RYTSVYSSAQTSVRGHSNKQLLGVIFGRCNLSPFIELYCTFTIGTSS 342
            RY++  SSA T+    S    + +    C+ +  ++ + T TI  S+
Sbjct: 921  RYSTTKSSAVTATNASSMIAPVALTAATCDQNKAVKKHITTTIDCST 967


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 263,709
Number of Sequences: 438
Number of extensions: 5951
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30355689
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)