Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_P04
         (909 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.95 
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               24   2.2  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    23   5.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   5.1  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   6.7  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   6.7  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 0.95
 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
 Frame = +3

Query: 552  LERAGD**ETGAQDQGRLRRL---REEHPGGDQED 647
            + RAG   E   +D  +L R    RE H GG QED
Sbjct: 1403 ISRAGSRDEDSTRDSTKLDRSSREREVHNGGQQED 1437


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
 Frame = +1

Query: 397 LEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVQNTVQES-QKLAKKVSSNVQETN 573
           +EQ  QN++   +     H  ++KNA    +K    +  ++Q+S +KL  K  S   E  
Sbjct: 48  MEQDDQNLKCYLKCFMTKHGILDKNAEVDVQKALRHLPRSMQDSTKKLFNKCKSIQNEDP 107

Query: 574 EKLAPKIKAAYDDF 615
            + A ++   Y +F
Sbjct: 108 CEKAYQLVKCYVEF 121


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 331 SCCSTDSEPSFQALTE 284
           S C  DS+P ++ LTE
Sbjct: 281 SICGIDSKPDYRELTE 296


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 58  LCCSPVRISSALSLSTVHHGRQVRSSLRLH 147
           L CS  R    LS+S +  GR +  S R+H
Sbjct: 630 LTCSVTRGDLPLSISWLKDGRAMGPSERVH 659


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -3

Query: 172 HHRSLGQSDAGEENYELGGHDVL 104
           HH+    + AG +   L GH VL
Sbjct: 920 HHQIQVSTSAGLQTIRLSGHSVL 942


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
 Frame = +3

Query: 3   CSHYLXXIGXP--LRYGLTTSVLQSG 74
           CSH+L   G P  +R G+ T ++ +G
Sbjct: 570 CSHHLTHKGKPIRMRIGIHTGMVLAG 595


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,819
Number of Sequences: 438
Number of extensions: 2844
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)