Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_P03
(915 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0071 + 548255-548399,548478-548651,548787-548892,548992-54... 87 2e-17
09_02_0075 + 3916373-3916400,3916760-3916858,3916943-3917116,391... 85 7e-17
02_05_1230 - 35099942-35100018,35100138-35100221,35100367-351004... 63 3e-10
10_08_0258 + 16261454-16261540,16261636-16261712,16262734-162628... 58 7e-09
04_01_0097 - 998766-999383,999479-999861,1000021-1000398,1000486... 31 0.97
07_03_1375 + 26120094-26120651 31 1.3
03_05_0440 + 24322332-24322388,24323478-24323615,24323654-243237... 31 1.3
04_03_0887 + 20557974-20558186,20558265-20558456,20558548-20558706 29 6.8
03_06_0454 + 34044351-34044499,34045495-34045510,34045640-340458... 29 6.8
03_06_0557 + 34704990-34705400,34706271-34706485,34707142-347073... 28 9.0
02_01_0029 - 176002-176137,176495-176646,177166-177577,178010-17... 28 9.0
>01_01_0071 +
548255-548399,548478-548651,548787-548892,548992-549130,
549216-549293,549395-549460,550061-550201,550417-550527,
550614-550655,550739-550825,551033-551118,551681-551684
Length = 392
Score = 87.0 bits (206), Expect = 2e-17
Identities = 54/171 (31%), Positives = 85/171 (49%)
Frame = +2
Query: 179 GKMGGLXKDIHPSDLLAVAAKESFKAGNVAPALVDTVNIGQVXXLXXTSXGGXSPRHAXL 358
G + G + + L +VA + + + NV PALV V +G V + G R A L
Sbjct: 28 GALLGSLSSLPATKLGSVAIQAALRRANVEPALVQEVFMGNVLS---ANLGQAPARQAAL 84
Query: 359 KSGVPQEKPALGVNRLCGSGFQAVINSAQDILTGTAQISLXGGTXNMSAVPFVVRNTRFG 538
+G+P P VN++C SG +AV+ +AQ I G + + GG +MS P V R G
Sbjct: 85 GAGLPDTVPCTTVNKVCSSGMKAVMLAAQTIQLGMHDVVVAGGMESMSNAPKYVAAARRG 144
Query: 539 VPLGVNIPFEDSLSAGSLDTYCNYTMPQTAENLAEKYXLKRGEVDQFSLQS 691
G ++ + L G D Y ++ M AE A+++ + R E D +++QS
Sbjct: 145 SRFGHDVLIDGMLKDGLWDVYNDFPMGMCAELCADQHSISREEQDLYAIQS 195
>09_02_0075 +
3916373-3916400,3916760-3916858,3916943-3917116,
3917207-3917312,3917671-3917809,3918457-3918534,
3918863-3918928,3919213-3919298,3919939-3920038,
3920245-3920355,3920457-3920498,3920671-3920757,
3921013-3921102
Length = 401
Score = 85.0 bits (201), Expect = 7e-17
Identities = 55/174 (31%), Positives = 83/174 (47%)
Frame = +2
Query: 170 PRFGKMGGLXKDIHPSDLLAVAAKESFKAGNVAPALVDTVNIGQVXXLXXTSXGGXSPRH 349
P G +G L + + L ++A + + K NV PALV V G V + G R
Sbjct: 20 PMGGFLGAL-SSLSATKLGSIAIEAALKRANVDPALVQEVFFGNVLS---ANLGQAPARQ 75
Query: 350 AXLKSGVPQEKPALGVNRLCGSGFQAVINSAQDILTGTAQISLXGGTXNMSAVPFVVRNT 529
A L +G+P VN++C SG +A + +AQ IL G I + GG +MS P +
Sbjct: 76 AALGAGIPNTVVCSAVNKVCASGMKATMFAAQSILLGINDIVVAGGMESMSNAPKYIAEA 135
Query: 530 RFGVPLGVNIPFEDSLSAGSLDTYCNYTMPQTAENLAEKYXLKRGEVDQFSLQS 691
R G G + + L G D Y ++ M AE A+ + L R + D +++QS
Sbjct: 136 RKGSRFGHDTLVDGMLKDGLWDVYGDFAMGNCAELCADNHALTREDQDAYAIQS 189
>02_05_1230 -
35099942-35100018,35100138-35100221,35100367-35100475,
35100564-35100687,35101157-35101253,35101375-35101507,
35101654-35101731,35101821-35101928,35102011-35102078,
35102181-35102279,35102379-35102505,35102623-35102707,
35103297-35103373,35103482-35103562
Length = 448
Score = 63.3 bits (147), Expect = 3e-10
Identities = 54/170 (31%), Positives = 71/170 (41%)
Frame = +2
Query: 182 KMGGLXKDIHPSDLLAVAAKESFKAGNVAPALVDTVNIGQVXXLXXTSXGGXSPRHAXLK 361
K GG KD +P DLL V K + P + + +G V L S R A
Sbjct: 63 KRGGF-KDTYPEDLLTVVLKAVLDNTKINPGEIGDIVVGTV--LGPGSQRAIECRAAAFY 119
Query: 362 SGVPQEKPALGVNRLCGSGFQAVINSAQDILTGTAQISLXGGTXNMSAVPFVVRNTRFGV 541
+GVP+ P VNR C SG QAV + A I G I + G +MS G
Sbjct: 120 AGVPENVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMSV-------NAMGW 172
Query: 542 PLGVNIPFEDSLSAGSLDTYCNYTMPQTAENLAEKYXLKRGEVDQFSLQS 691
VN + A C M T+EN+A +Y + R E DQ + +S
Sbjct: 173 EGQVNPKVNEVQKAQD----CLLPMGITSENVAHRYGVTRQEQDQAAAES 218
>10_08_0258 +
16261454-16261540,16261636-16261712,16262734-16262818,
16262931-16263057,16263147-16263245,16263343-16263410,
16263514-16263621,16263727-16263804,16263921-16264053,
16264138-16264234,16264465-16264588,16264668-16264776,
16264899-16264982,16265071-16265180
Length = 461
Score = 58.4 bits (135), Expect = 7e-09
Identities = 52/178 (29%), Positives = 77/178 (43%)
Frame = +2
Query: 182 KMGGLXKDIHPSDLLAVAAKESFKAGNVAPALVDTVNIGQVXXLXXTSXGGXSPRHAXLK 361
K GG KD DLL K + P+ V + +G V L S R A
Sbjct: 65 KRGGF-KDTPAEDLLVPVFKALIDKTKLNPSEVGDIVVGTV--LAPGSQRAIECRMAAFY 121
Query: 362 SGVPQEKPALGVNRLCGSGFQAVINSAQDILTGTAQISLXGGTXNMSAVPFVVRNTRFGV 541
+G P P + VNR C SG QAV N A +I G I + G +M+ V R
Sbjct: 122 AGFPDTVPLMTVNRQCSSGLQAVANVASNIKAGLYDIGIAAGLESMT-----VNQVRLDG 176
Query: 542 PLGVNIPFEDSLSAGSLDTYCNYTMPQTAENLAEKYXLKRGEVDQFSLQSQXEMENSA 715
+ + L + + D C M T+EN+A+++ + R E DQ +++S + +A
Sbjct: 177 QVNPKV----ELFSQARD--CLLPMGLTSENVAKRFGITRMEQDQAAVESHRKAAAAA 228
>04_01_0097 -
998766-999383,999479-999861,1000021-1000398,
1000486-1000711,1000799-1001323,1003032-1003164,
1004353-1004435,1004645-1005349,1005483-1005556,
1006290-1006392,1006485-1006727
Length = 1156
Score = 31.5 bits (68), Expect = 0.97
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 11/86 (12%)
Frame = +3
Query: 489 RXTCQQFRLSSGTPVSE-YLWA*IFP-SKIPSQRDLWTHT------ATTLCLKLLKIWLR 644
R + +Q SS +PV + L++ IF K+ S R + H A + L L+ +WLR
Sbjct: 419 RCSARQQAKSSASPVVQPLLFSPIFRVPKMESNRQQYVHCFLLRQKAVVILLVLILVWLR 478
Query: 645 NTXSKGEKLISFRFNPSXR---WKTA 713
N K K R+ P W+T+
Sbjct: 479 NKNGKRSKCKGVRYGPLIHRDVWRTS 504
>07_03_1375 + 26120094-26120651
Length = 185
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 454 NRYGSDFLXRWHGXHVSSSVCRQEHP 531
+R+ S+ L RW G H S VCR+E P
Sbjct: 106 HRFHSECLERWLGVHGSCPVCRRELP 131
>03_05_0440 +
24322332-24322388,24323478-24323615,24323654-24323736,
24325038-24325128,24326091-24326189,24326356-24326418,
24327182-24327259,24329354-24329543,24329812-24330065,
24330159-24330531,24331193-24331276,24332085-24332371,
24332495-24332542,24333194-24333220,24333951-24333987,
24334063-24334250,24334343-24334521,24334595-24334877,
24335481-24335717,24335798-24335988,24336552-24336561,
24336844-24336984,24337073-24337288,24338437-24338727,
24338852-24339025
Length = 1272
Score = 31.1 bits (67), Expect = 1.3
Identities = 22/79 (27%), Positives = 33/79 (41%)
Frame = +2
Query: 215 SDLLAVAAKESFKAGNVAPALVDTVNIGQVXXLXXTSXGGXSPRHAXLKSGVPQEKPALG 394
SDL V+A+E + N A VDT S G + LK+ P+ +P G
Sbjct: 620 SDLDNVSAEEGKVSSNKAMDTVDTTQGATTQQADLASKGRSRRKIGILKALAPECRPTDG 679
Query: 395 VNRLCGSGFQAVINSAQDI 451
+ L F +N+ D+
Sbjct: 680 ADDLRSDKFSYAVNNVIDL 698
>04_03_0887 + 20557974-20558186,20558265-20558456,20558548-20558706
Length = 187
Score = 28.7 bits (61), Expect = 6.8
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 620 QTAENLAEKYXLKRGEVDQFSLQSQXEMENSARQRRLQ 733
QTAE + EKY L+ G FS + E E R+ R +
Sbjct: 54 QTAEEITEKYGLEFGLWKVFSSKEGEEEEGKTRKSRTE 91
>03_06_0454 +
34044351-34044499,34045495-34045510,34045640-34045862,
34045969-34046092,34046168-34046294,34046821-34046882,
34046972-34048023,34048167-34048556,34048667-34052628,
34052710-34052796,34052885-34053004,34053096-34053152
Length = 2122
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 341 PRHAXLKSGVPQEKPALGVNRLCGSGFQAVINSAQDILT 457
PR LK P+E ++R+C Q +I+S Q I +
Sbjct: 249 PRTTKLKYRYPRESDHKNISRICREHLQEIISSQQKIFS 287
>03_06_0557 +
34704990-34705400,34706271-34706485,34707142-34707367,
34707447-34707532,34708030-34708121,34708232-34708471,
34709455-34709750
Length = 521
Score = 28.3 bits (60), Expect = 9.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 685 SIPARDGKQRTTAASSRLRWPRXTVKVKRQ 774
S P RDG +RT A+SS W + KR+
Sbjct: 458 SAPPRDGDERTVASSSSTPWWSGDPEAKRR 487
>02_01_0029 -
176002-176137,176495-176646,177166-177577,178010-178126,
178260-178322,178964-179167,180605-180687,182394-182516,
182987-183328
Length = 543
Score = 28.3 bits (60), Expect = 9.0
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -3
Query: 721 LSCAVFHLXLGLKRKLINFSP--FEXVFLSQIFSSLRHSVVAVCVQRSR*EGIFEGNI 554
L+C F L + L+ KL P F FSS++ VVA+ QR + GNI
Sbjct: 383 LNCISFSLWMLLQGKLTKKYPAVFSSTAFMTSFSSMQAGVVALTTQRRLSVWLIRGNI 440
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,564,475
Number of Sequences: 37544
Number of extensions: 435012
Number of successful extensions: 1006
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1006
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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