Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_O24
         (917 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0061 - 422914-423027,423114-423149,423250-423324,423412-42...    29   5.2  
01_07_0338 - 42840890-42841006,42841101-42841136,42841226-428413...    29   5.2  
07_03_0081 - 13203140-13203822,13204979-13205045                       28   9.0  
01_05_0713 - 24548701-24549930                                         28   9.0  

>05_01_0061 -
           422914-423027,423114-423149,423250-423324,423412-423465,
           423554-423620,423912-424025,424114-424215,424220-424269,
           424380-424424,424559-424642,424996-425100,425300-425443,
           425535-425643,425738-425766
          Length = 375

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = +3

Query: 435 SSPALEPDRGRTWA*TAR 488
           S P LEPDRG TW  T R
Sbjct: 236 SQPGLEPDRGLTWQMTKR 253


>01_07_0338 -
           42840890-42841006,42841101-42841136,42841226-42841300,
           42841380-42841433,42841703-42841769,42841844-42841900,
           42842163-42842276,42842354-42842455,42842538-42842653,
           42842892-42842975,42843429-42843533,42843732-42843875,
           42843961-42844069,42844149-42844177
          Length = 402

 Score = 29.1 bits (62), Expect = 5.2
 Identities = 12/18 (66%), Positives = 12/18 (66%)
 Frame = +3

Query: 435 SSPALEPDRGRTWA*TAR 488
           S P LEPDRG TW  T R
Sbjct: 243 SQPGLEPDRGLTWQMTKR 260


>07_03_0081 - 13203140-13203822,13204979-13205045
          Length = 249

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = +2

Query: 767 VWAARSCCPRAAAYFHXDAGXFPARRL-CSDAGXGXLPAXLSSWTXR 904
           +WA R C   A+  F  ++G     R+ C   G G  P+ LS +T R
Sbjct: 78  IWARRLCSTDASGRFSCESGDCGTGRVECDGRGNGP-PSTLSEFTLR 123


>01_05_0713 - 24548701-24549930
          Length = 409

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 19/58 (32%), Positives = 26/58 (44%)
 Frame = +3

Query: 549 VHPXRSAQGQQRLPPATAAQRRDQDCVARKLPADGRETRKGX*SGREEPHGQVQLYHV 722
           +HP       +  P A AA R + D VA  LPA     RK        PH +++L H+
Sbjct: 71  LHPVHRVLHARLTPRAAAALRLEADAVASSLPASIVRIRKLLLLA--PPHHRLRLEHI 126


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,203,462
Number of Sequences: 37544
Number of extensions: 564974
Number of successful extensions: 1832
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1832
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)