Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_O23
         (1022 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127078-1|BAC86815.1|  844|Homo sapiens protein ( Homo sapiens ...    31   5.1  

>AK127078-1|BAC86815.1|  844|Homo sapiens protein ( Homo sapiens cDNA
            FLJ45135 fis, clone BRAWH3038252, highly  similar to
            Formin 1 isoform IV. ).
          Length = 844

 Score = 31.5 bits (68), Expect = 5.1
 Identities = 21/76 (27%), Positives = 23/76 (30%)
 Frame = +3

Query: 783  SPPXXXPXXXAPPXFLTPXPXXTKXXXPGPXXPLPXKXEKXVXXFXPXXPXPXXXGXXPX 962
            SP    P   A P    P P       P    P P      +    P  P P   G  P 
Sbjct: 314  SPAPPMPPVSAGPPLPPPPPPPPPLPPPSSAGPPPPPPPPPL----PNSPAPPNPGGPPP 369

Query: 963  XPGXXGAXSPPPKXLW 1010
             P   G   PPP  L+
Sbjct: 370  APPPPGLAPPPPPGLF 385


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,481,284
Number of Sequences: 237096
Number of extensions: 1474663
Number of successful extensions: 2545
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1836
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2379
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13765548174
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)