Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_O22
(884 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132865-17|CAB60596.2| 130|Caenorhabditis elegans Hypothetical... 68 8e-12
AF036706-15|AAK39285.1| 145|Caenorhabditis elegans Hypothetical... 58 8e-09
AF036706-16|AAM97947.1| 139|Caenorhabditis elegans Hypothetical... 48 9e-06
Z70270-9|CAI79144.1| 261|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z81117-8|CAB03316.2| 334|Caenorhabditis elegans Hypothetical pr... 29 3.3
AL117204-39|CAB55145.4| 422|Caenorhabditis elegans Hypothetical... 29 3.3
U50308-8|AAG24032.1| 562|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z83106-4|CAB05496.1| 343|Caenorhabditis elegans Hypothetical pr... 28 7.7
>AL132865-17|CAB60596.2| 130|Caenorhabditis elegans Hypothetical
protein Y62E10A.2 protein.
Length = 130
Score = 68.1 bits (159), Expect = 8e-12
Identities = 29/97 (29%), Positives = 56/97 (57%)
Frame = +3
Query: 117 RYPNKNYALKKRLPPRPVNGDNVLFITKKTNFKAQLDKCCDLLTRGEKEIILHGLGAAIQ 296
R+ K +++R P +P + N ++IT+KTN ++Q ++L E+ +HG+GA+I
Sbjct: 11 RFDEKTNEMRRRPPVKPSSNPNHIYITRKTNVESQSKSTEEMLNNAFDEVFIHGMGASIN 70
Query: 297 RCCNLALQLEILFSGTCQIEVNTGSVDLVDDLEPLTD 407
+ A+++E F G+ + ++ T +V DD+ L D
Sbjct: 71 KALVFAMEVERRFGGSVKSDIQTSTVQCTDDIVSLLD 107
>AF036706-15|AAK39285.1| 145|Caenorhabditis elegans Hypothetical
protein T07A9.12a protein.
Length = 145
Score = 58.0 bits (134), Expect = 8e-09
Identities = 28/104 (26%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Frame = +1
Query: 508 IMFFTLNEIVQWIGLTVFEIWINLITLTIFSVLLALKIDGVLNSAWWTIFAPLFVSDAMN 687
++ TL E+ W +T+FE+W++ + + SV+L LK+ ++ ++ + +PLFV A +
Sbjct: 1 MVLLTLREMTTWFDITLFELWVHFAAIIVSSVMLCLKLHETVSISYMWVASPLFVGLAFS 60
Query: 688 AYFCCIVCIRMNLE-NSYKASLYRASWSGIFLGLTFVFNFYFVE 816
+F I+ +R +E Y+ R + L +F ++ VE
Sbjct: 61 YFFVFIIYLRSCVEFKDYRGPTVRVILNIFRLTCITLFIYFIVE 104
>AF036706-16|AAM97947.1| 139|Caenorhabditis elegans Hypothetical
protein T07A9.12b protein.
Length = 139
Score = 48.0 bits (109), Expect = 9e-06
Identities = 26/104 (25%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Frame = +1
Query: 508 IMFFTLNEIVQWIGLTVFEIWINLITLTIFSVLLALKIDGVLNSAWWTIFAPLFVSDAMN 687
++ TL E+ W +T+FE+W++ F+ ++ LK+ ++ ++ + +PLFV A +
Sbjct: 1 MVLLTLREMTTWFDITLFELWVH------FAAIICLKLHETVSISYMWVASPLFVGLAFS 54
Query: 688 AYFCCIVCIRMNLE-NSYKASLYRASWSGIFLGLTFVFNFYFVE 816
+F I+ +R +E Y+ R + L +F ++ VE
Sbjct: 55 YFFVFIIYLRSCVEFKDYRGPTVRVILNIFRLTCITLFIYFIVE 98
>Z70270-9|CAI79144.1| 261|Caenorhabditis elegans Hypothetical
protein C53D6.11 protein.
Length = 261
Score = 29.9 bits (64), Expect = 2.5
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = +1
Query: 574 NLITLTIFSVLLALKIDGVLNSAWWTIFAPLFVSDAMNAYFCCIVCIRMNLENSYKASLY 753
+L T+ V LAL + LNSA++ F++ + CI + NS A L
Sbjct: 157 SLAITTVCVVALALLLHRNLNSAYFRPVMLHFIATLFLEEVPLLTCILLKYSNSKSAILA 216
Query: 754 RASWSGIFLGLTFVFNFYFVENYKVIR--LXNTVKFWTII 867
+ + + + + YFV N++ R + N + W I+
Sbjct: 217 ADITNWLVCIHSLLHSAYFVYNHQDYREAVRNLFRKWKIV 256
>Z81117-8|CAB03316.2| 334|Caenorhabditis elegans Hypothetical
protein T06E6.7 protein.
Length = 334
Score = 29.5 bits (63), Expect = 3.3
Identities = 22/97 (22%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
Frame = +1
Query: 541 WIGLTVFEIWINLITLTIFSVLLALKIDGVLNSAWWTIFAPLFVSDAMNAYFCCIVCIRM 720
W + + + I IF + + G+L + W+ I P + M+ +F +V M
Sbjct: 50 WTVILDLSLTVLTIPFVIFPAIAGTPL-GILTT-WFGISTPFQIYFVMSTFFIVMVSHLM 107
Query: 721 NLENS-YKASLYRASWSGIFLGLTFVFNFYFVENYKV 828
+EN Y+ W + + F FNF Y +
Sbjct: 108 IMENRYYQLFAEDTEWRHFRVPVIF-FNFLITSTYMI 143
>AL117204-39|CAB55145.4| 422|Caenorhabditis elegans Hypothetical
protein Y116A8C.9 protein.
Length = 422
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 586 LTIFSVLLALKIDGVLNSAWWTIFAPLFVSDAM 684
L IF+ L LK+DG ++ ++ +FAPL+ + +
Sbjct: 24 LLIFTALFTLKLDGKVSFSYAFVFAPLWACNLL 56
>U50308-8|AAG24032.1| 562|Caenorhabditis elegans Hypothetical
protein F07C3.10 protein.
Length = 562
Score = 29.1 bits (62), Expect = 4.4
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Frame = -3
Query: 774 YSTPRCXXXXXXXXXFQIHSYAYNTAK---VC---IHRITHKQRCKYC 649
YS P C IH AY K +C I RIT ++C+YC
Sbjct: 48 YSVPACHGCKSFFRRAIIHKTAYPECKYDKMCFSKISRITRPRKCRYC 95
>Z83106-4|CAB05496.1| 343|Caenorhabditis elegans Hypothetical
protein F22B8.5 protein.
Length = 343
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = -2
Query: 679 HHSQTKVQILSTMHYSIHHQF*E-LTVQKI 593
H QTK+ +LS H +H QF LT+Q +
Sbjct: 229 HGMQTKLSLLSAQHRRLHRQFFRALTIQVV 258
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,319,712
Number of Sequences: 27780
Number of extensions: 383069
Number of successful extensions: 896
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 871
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 896
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -