Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_O17
         (893 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1008 - 7987936-7988628,7988923-7989102                           32   0.71 
07_01_1201 - 11419851-11419913,11420090-11420311                       30   2.2  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.7  

>01_01_1008 - 7987936-7988628,7988923-7989102
          Length = 290

 Score = 31.9 bits (69), Expect = 0.71
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = -2

Query: 700 GGQVSGKRQGRNRRAXRGSFQGETPG 623
           GG+V+G+   R+RR  RG+++GE  G
Sbjct: 249 GGEVNGEEAARSRRRRRGAWEGEEEG 274


>07_01_1201 - 11419851-11419913,11420090-11420311
          Length = 94

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
 Frame = +1

Query: 547 LRPPDEHHKNRRSSQRWRN--PTGL*RYQAFPPGSSLXALSCSDPAAYRIPVR-LSPXRE 717
           L PP          Q+WR+  PTG   + +FP G+   A     PA  R P   L P R 
Sbjct: 13  LLPPPPPLPALPQGQQWRSTGPTGKLCFCSFPAGALPPAAGAGQPAPDRQPATPLFPSRV 72

Query: 718 AWRFLIAHAVGISVRCXSFAP 780
           A      + + + +   +F P
Sbjct: 73  AEGLFGLNGIEVGIEGDNFTP 93


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 307 NESAN---ARGEAVCVLGALPLPRSLTRCAR 390
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,932,152
Number of Sequences: 37544
Number of extensions: 478822
Number of successful extensions: 1247
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1246
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2518669100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)