Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_O12
         (909 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0098 + 4235938-4237113                                           31   1.3  
03_01_0141 + 1116833-1117082,1117658-1118574,1119417-1119579,111...    30   2.9  
06_01_0931 + 7192519-7194075                                           29   3.9  
08_01_0998 - 10136050-10138356                                         29   6.7  
02_05_1225 + 35060642-35060815,35061254-35061802,35062284-350623...    29   6.7  
10_08_1048 - 22553676-22554866                                         28   8.9  
07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166           28   8.9  
07_01_0370 + 2749353-2749786,2749949-2750346,2750435-2750519,275...    28   8.9  

>09_02_0098 + 4235938-4237113
          Length = 391

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = -3

Query: 691 RVLPLSPQCSRTSRDTHLNM*STPPPSVLKLGALGMALGEFLIANALALRSWLLLWNKLT 512
           R+LP++PQ  R   D    M S     + ++ A+G+ L  FL+A  +  +   L  N + 
Sbjct: 59  RILPMAPQARRWRADGSTTM-SVASLPLNQVRAIGLFLNTFLVA-TMRRQEGPLYHNAIV 116

Query: 511 LPA-TPSCSPKP 479
           +P   P+ +P P
Sbjct: 117 IPTIAPAPAPAP 128


>03_01_0141 +
           1116833-1117082,1117658-1118574,1119417-1119579,
           1119668-1120497,1120562-1120570
          Length = 722

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 16/32 (50%), Positives = 19/32 (59%)
 Frame = -2

Query: 506 CDAELLPEAGNAGPGQTQPVPVSATWTNEHEA 411
           C A LLPE GN G GQ+    V+ +  NE EA
Sbjct: 486 CSATLLPEEGNTGDGQSP--KVNRSIANEVEA 515


>06_01_0931 + 7192519-7194075
          Length = 518

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
 Frame = -3

Query: 625 TPPPSVLKLGALG-MALGEFLIANALALRSWLLLW-NKLTLPATPSCSPKPGMRVPVRL- 455
           +PP     L +L   A    ++   +ALR+ +L W ++L+LP     SP     V  RL 
Sbjct: 70  SPPAVAADLSSLPPSASSPLVLVPNVALRTAILNWCDRLSLPYPAPLSPDTARDVVRRLM 129

Query: 454 -SPCPFLQHGQTNMKPPARSTMSSILYTS 371
            SP P     Q    PP  S++ +  Y S
Sbjct: 130 PSPPPPPPRSQAPPPPPPASSVRTRSYYS 158


>08_01_0998 - 10136050-10138356
          Length = 768

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 729 PPSVCNTTSSQYLAYCRCHLSAHGRAEI 646
           PP++CNTT  +YL   +  L+    AEI
Sbjct: 229 PPTICNTTKLKYLRLAKNKLTGEIPAEI 256


>02_05_1225 +
           35060642-35060815,35061254-35061802,35062284-35062348,
           35062417-35062957,35063321-35064610
          Length = 872

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 21/63 (33%), Positives = 28/63 (44%)
 Frame = -3

Query: 880 TKICKKGVSNFLKPALKSSELDGDRNRFSLPPAE*SFRLMTSECAALNDAPTFCLQYDLE 701
           T       SN   PA  SS + G+    S+ P+E  FR+       L+ AP F L   L+
Sbjct: 478 TSTMHSSYSNLFDPAPSSSWITGNFKEPSVMPSELKFRI-------LDKAPEFNLDLKLD 530

Query: 700 SVP 692
           S P
Sbjct: 531 SFP 533


>10_08_1048 - 22553676-22554866
          Length = 396

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 18/60 (30%), Positives = 26/60 (43%)
 Frame = -3

Query: 628 STPPPSVLKLGALGMALGEFLIANALALRSWLLLWNKLTLPATPSCSPKPGMRVPVRLSP 449
           ST PP +L       A  E L+    A+R+ +   N L     P   P P + +  RL+P
Sbjct: 47  STAPPLLLPAAHQAQAQDEQLLRQLTAIRATVSQLNHLRSSTPPPPPPPPELLLYSRLAP 106


>07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166
          Length = 545

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 218 SVRVHCEAAGLSPRTCRHVST 156
           S+R+HC A  L+PR CR   T
Sbjct: 401 SLRLHCPAPLLAPRKCRETCT 421


>07_01_0370 +
           2749353-2749786,2749949-2750346,2750435-2750519,
           2751200-2751314,2751538-2751591
          Length = 361

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 19/38 (50%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -2

Query: 275 AEHVLVVAGERDLQGGPGGSVRVHCEAAGLSP-RTCRH 165
           A  V++ AG R   GG GG V VH  AA  SP  T RH
Sbjct: 17  AASVVIAAGPR--YGGGGGGVHVHPWAAFPSPTATTRH 52


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,145,064
Number of Sequences: 37544
Number of extensions: 499692
Number of successful extensions: 1644
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1642
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)