Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_O12
         (909 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    25   0.95 
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    23   5.1  
AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    22   6.7  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    22   6.7  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   6.7  

>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 25.0 bits (52), Expect = 0.95
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = +3

Query: 504 AGKVNLFHNNNHDLSAKAFAIRNSPSAIPNAPNFNTL 614
           +G++N+  +++HD S + +A  + P  I + PN + L
Sbjct: 68  SGQLNII-SSDHDDSDEEYAANSQPPRITSVPNTSRL 103


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -3

Query: 583 ALGEFLIANALALRSWL 533
           ALGEF++   L LRS L
Sbjct: 276 ALGEFVVVKVLDLRSQL 292


>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -1

Query: 474 CGSRSDSARARFCNMDKRT*SHQPGAQ*AVYCILAA 367
           C S   + +A+  ++DK    ++P     +YC+L A
Sbjct: 45  CMSEHGTTQAQIDDVDKGNLVNEPSITCYMYCLLEA 80


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = -1

Query: 474 CGSRSDSARARFCNMDKRT*SHQPGAQ*AVYCILAA 367
           C S   + +A+  ++DK    ++P     +YC+L A
Sbjct: 45  CMSEHGTTQAQIDDVDKGNLVNEPSITCYMYCLLEA 80


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
 Frame = -2

Query: 488 PEAGNAG-PGQTQPVPVSAT--WTNEHEATSPEHN 393
           P+ G    P +TQP P SAT   T       P+H+
Sbjct: 285 PDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHH 319


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,471
Number of Sequences: 438
Number of extensions: 3921
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)