Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_O09
         (902 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    25   1.2  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   6.7  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   8.8  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = -3

Query: 621 GLGSPKLNVEVKIPNGKAPIPNDMWNPSPKPKP 523
           G  S  + ++V I + + P+     +PSP P+P
Sbjct: 856 GCPSNMMELQVDIADSQQPLNLSKKSPSPSPRP 888


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +2

Query: 713 AGVCLTAHKYCHQVTILNNSVNIY 784
           + VC   HK    +  LNN  +IY
Sbjct: 401 SAVCALCHKVFRTLNSLNNHKSIY 424


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +1

Query: 37  SLKILIDIYLTDQQS 81
           SL I +D+Y T+QQS
Sbjct: 57  SLPIDVDVYNTEQQS 71


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,753
Number of Sequences: 438
Number of extensions: 6974
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29267238
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)