Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_O08
(941 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_01_0752 - 6327269-6327764,6328571-6328839 32 0.76
07_03_1136 + 24218601-24218734,24218769-24219906 31 1.8
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.8
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 30 3.1
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 29 4.1
03_05_0704 - 26953474-26953643,26953770-26953801,26953915-269540... 29 7.1
10_08_0501 - 18365871-18366170,18366190-18366372,18366458-18366634 28 9.4
03_02_0561 + 9466428-9466502,9466503-9467243,9467592-9467600 28 9.4
>11_01_0752 - 6327269-6327764,6328571-6328839
Length = 254
Score = 31.9 bits (69), Expect = 0.76
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = -1
Query: 599 APPPAXGEKGXXXRQPXXGGXXVFPPRXEGXPXTXAGRXGGGG 471
+PPP GE P GG PPR G T A GG G
Sbjct: 91 SPPPTSGEPSAVHASPPTGGSP-RPPRSGGGDATSAAVGGGAG 132
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/61 (31%), Positives = 20/61 (32%)
Frame = -1
Query: 653 GAEPXGKGPAXRPWGXKXAPPPAXGEKGXXXRQPXXGGXXVFPPRXEGXPXTXAGRXGGG 474
G + P G PP G G R P GG P R G G GGG
Sbjct: 153 GGGALARPPGGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGGGGGLGGGG 212
Query: 473 G 471
G
Sbjct: 213 G 213
Score = 29.9 bits (64), Expect = 3.1
Identities = 23/62 (37%), Positives = 23/62 (37%), Gaps = 4/62 (6%)
Frame = -1
Query: 644 PXGKGPAXRPWGXKXAPPPAXGEKGXXXRQP--XXGGXXVFPPRXEGXPXTXAGR--XGG 477
P G G A P G A PP G G P GG PP G A R GG
Sbjct: 91 PPGGGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAPGGGGGGGAPRRVLGG 150
Query: 476 GG 471
GG
Sbjct: 151 GG 152
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.7 bits (66), Expect = 1.8
Identities = 20/60 (33%), Positives = 23/60 (38%)
Frame = +1
Query: 472 PPPPXRPAXVXGXPSLRGGNTXXPPXXGWRXXXPFSPXAGGGAXXXPQGRXAGPFPXGSA 651
PPPP P +G + PP G + P P GGA P A P GSA
Sbjct: 344 PPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPP---AAPGVPTGSA 400
>07_03_0329 +
16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 29.9 bits (64), Expect = 3.1
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -2
Query: 541 GXPYSXPGXRGXRXPQPXGXGGGVXXXGSGRAP 443
G PYS RG P G GGG G G P
Sbjct: 36 GAPYSGGRGRGQDGSYPGGRGGGYGGGGGGGGP 68
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.5 bits (63), Expect = 4.1
Identities = 21/67 (31%), Positives = 21/67 (31%), Gaps = 1/67 (1%)
Frame = +1
Query: 448 PFHFXSX*PPPPXRPAXVXGXPSLRG-GNTXXPPXXGWRXXXPFSPXAGGGAXXXPQGRX 624
P F PPP P RG G PP P P GG P GR
Sbjct: 1166 PAGFRGGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGGRG 1225
Query: 625 AGPFPXG 645
P P G
Sbjct: 1226 L-PAPPG 1231
Score = 28.7 bits (61), Expect = 7.1
Identities = 24/76 (31%), Positives = 26/76 (34%), Gaps = 10/76 (13%)
Frame = +1
Query: 472 PPPPXRPAXVXGXPSLR-----GGNTXXPPXXGWRXXXPFSPXAGGGAXXXP-----QGR 621
PP P P + G P GG PP G+R P P A GG P G
Sbjct: 1136 PPAPPLPEGIGGVPPPPPVGGLGGPPAPPPPAGFRGGTP-PPNAHGGVAPPPPPPRGHGG 1194
Query: 622 XAGPFPXGSAPLXXXP 669
GP AP P
Sbjct: 1195 VGGPPTPPGAPAPPMP 1210
Score = 28.3 bits (60), Expect = 9.4
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -3
Query: 597 PPPGXXGKRXXPAPTPXGGXXRIPXP 520
PPP G P P P GG +P P
Sbjct: 1099 PPPPSIGAGAPPPPPPPGGITGVPPP 1124
>03_05_0704 -
26953474-26953643,26953770-26953801,26953915-26954009,
26954107-26954180,26954283-26954412,26954522-26954585,
26954660-26954722,26954795-26954937,26955386-26955523,
26955610-26955731,26955805-26955976,26956559-26956630,
26956753-26956887,26956987-26957103,26957184-26957316,
26957455-26957561,26958060-26958077,26958235-26958379,
26958472-26958671,26960744-26961421
Length = 935
Score = 28.7 bits (61), Expect = 7.1
Identities = 21/70 (30%), Positives = 24/70 (34%)
Frame = -2
Query: 520 GXRGXRXPQPXGXGGGVXXXGSGRAPXXPTXXPXXXADSFRGGKTXXXXPXXLXXXTQAI 341
G RG R P G GG G+GR P P A GG + +
Sbjct: 55 GERGGRHDAPRGRGGVAVGAGAGRQQQQPFHAP---APPSGGGGRGGVQVQPNAAARRPV 111
Query: 340 GGGXKGXCXP 311
GGG G P
Sbjct: 112 GGGRGGVGVP 121
>10_08_0501 - 18365871-18366170,18366190-18366372,18366458-18366634
Length = 219
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +1
Query: 472 PPPPXRPAXVXGXPSLRGGNTXXPPXXGWR 561
PPP RP P+ T PP GWR
Sbjct: 107 PPPEERPRGWMPCPAAMAMPTPRPPNKGWR 136
>03_02_0561 + 9466428-9466502,9466503-9467243,9467592-9467600
Length = 274
Score = 28.3 bits (60), Expect = 9.4
Identities = 21/77 (27%), Positives = 26/77 (33%), Gaps = 3/77 (3%)
Frame = -1
Query: 629 PAXRPW---GXKXAPPPAXGEKGXXXRQPXXGGXXVFPPRXEGXPXTXAGRXGGGGXXEX 459
P RPW G + AP K R+P G P +G GGGG
Sbjct: 46 PRRRPWSRGGGRAAPESTPPAKYARGRRPRRGSGG-------HAPHPESGGGGGGGGGAR 98
Query: 458 KWKGAPXANRXSXXXGR 408
+W+ R GR
Sbjct: 99 EWRDVGTTMRGGGGRGR 115
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,798,566
Number of Sequences: 37544
Number of extensions: 299055
Number of successful extensions: 804
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2706104940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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