Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_O05
         (926 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0931 - 21647562-21649037                                         36   0.035
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   9.2  
06_03_1155 - 28065126-28065139,28065268-28065324,28065571-28066312     28   9.2  
06_03_1150 + 28022633-28023374,28023501-28023565                       28   9.2  

>10_08_0931 - 21647562-21649037
          Length = 491

 Score = 36.3 bits (80), Expect = 0.035
 Identities = 18/42 (42%), Positives = 22/42 (52%)
 Frame = +3

Query: 609 P*APPP*RASQKSTLKSEVVAKPRQDYKDTRRFPPWKXPXAP 734
           P +P P R S  S+L  E +AK  +DY   RR P    P AP
Sbjct: 234 PPSPSPKRLSPASSLSKETLAKASEDYSSRRRSPYKSSPPAP 275


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 376 NESAN---ARGEAVCVLGALPLPRSLTRCAR 459
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>06_03_1155 - 28065126-28065139,28065268-28065324,28065571-28066312
          Length = 270

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 15/39 (38%), Positives = 16/39 (41%)
 Frame = +2

Query: 776 PPFSXSGKRGPFP*PXAVGXXXSGXGRSPPXGXXFXKXP 892
           PP + SG R PFP P       S  G  P  G  F   P
Sbjct: 94  PPSAGSGFRFPFPLPLPFPAPASPGGAPPSSGSGFPAFP 132


>06_03_1150 + 28022633-28023374,28023501-28023565
          Length = 268

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 15/39 (38%), Positives = 16/39 (41%)
 Frame = +2

Query: 776 PPFSXSGKRGPFP*PXAVGXXXSGXGRSPPXGXXFXKXP 892
           PP + SG R PFP P       S  G  P  G  F   P
Sbjct: 94  PPSAGSGFRFPFPLPLPFPAPASPGGAPPSSGSGFPAFP 132


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,895,969
Number of Sequences: 37544
Number of extensions: 296152
Number of successful extensions: 680
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 680
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2647531240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)