Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_O02
(883 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 113 2e-25
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 109 2e-24
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 52 8e-07
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 52 8e-07
01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932 50 3e-06
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 48 1e-05
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 47 2e-05
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319 45 7e-05
03_01_0249 - 1935355-1935827,1936129-1936330 38 0.011
01_01_1176 - 9372879-9373097,9373814-9374278,9374372-9375447,937... 38 0.014
10_06_0131 - 11066033-11066251,11066548-11067012,11067102-110681... 35 0.075
02_04_0267 - 21430370-21430474,21430559-21430618,21430937-214310... 32 0.53
02_05_1202 + 34932291-34933027,34933297-34933774 31 1.2
11_06_0584 - 25220371-25222917 31 1.6
06_01_0611 + 4420873-4422207 30 2.8
02_04_0633 - 24616563-24617279 30 2.8
10_08_0710 + 20070655-20070990,20071074-20071469 29 3.7
10_08_0313 - 16677849-16679060,16679158-16679244,16679749-16680111 29 3.7
01_01_0735 + 5730783-5733320 29 4.9
05_01_0123 - 846081-846167,846264-846404,846749-846866,847382-84... 29 6.5
05_04_0124 + 18232961-18236636,18236810-18237288,18237549-182376... 28 8.6
05_04_0122 + 18198594-18202269,18202551-18202591,18203273-182032... 28 8.6
04_04_1247 - 32043776-32043880,32044296-32044505,32044595-320451... 28 8.6
>02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 113 bits (271), Expect = 2e-25
Identities = 67/171 (39%), Positives = 97/171 (56%), Gaps = 13/171 (7%)
Frame = +1
Query: 118 ILYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 297
+L+T+ N A+KALIAA+YSG V++A NF G +NK+ ++LK P GKVP E+ DG
Sbjct: 565 VLHTFDGNKNAFKALIAAEYSGVKVELAKNFQMGVSNKTPEYLKMNPIGKVPILETPDGP 624
Query: 298 VLLTESNAIAYYVANES-------------LRGGDLATQARVWQWASWSDSELLPASCAW 438
V ESNAIA YV + S L G L A + QW +S +E+ + W
Sbjct: 625 VF--ESNAIARYVLSSSHFPEVTRSKSDNPLYGSSLIEYAHIEQWIDFSATEVDANTGKW 682
Query: 439 VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIV 591
+FP LG + + E A + L +L L+ HL + T+LV +TLAD+++
Sbjct: 683 LFPRLGFAPYVAVSEEAAIAALKRSLGALNTHLASNTYLVGHSVTLADIVM 733
Score = 107 bits (256), Expect = 2e-23
Identities = 65/171 (38%), Positives = 94/171 (54%), Gaps = 13/171 (7%)
Frame = +1
Query: 118 ILYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 297
+L+ N A+KALIAA+YSG V++ NF G +NK+ +FLK P GK+P E+ DG
Sbjct: 4 VLHAGSGNKNAFKALIAAEYSGVKVELVKNFQMGVSNKTPEFLKMNPIGKIPVLETPDGP 63
Query: 298 VLLTESNAIAYYV-------------ANESLRGGDLATQARVWQWASWSDSELLPASCAW 438
V ESNAIA YV A+ L G L A + QW +S +E+ W
Sbjct: 64 VF--ESNAIARYVLSHCHFPEVTRSKADNPLYGSSLIEYAHIEQWNDFSATEVDANIGKW 121
Query: 439 VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIV 591
++P LGI + + E A + L +L L+ HL + T+LV +TLAD+++
Sbjct: 122 LYPRLGIAPYVAVSEEAAIAALKRSLGALNTHLASNTYLVGHSVTLADIVM 172
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +2
Query: 602 LLHAFQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPK 757
L F ++ S S +V+R+F T+ +QP V+G + + P K
Sbjct: 176 LYMGFARIMTKSFTSEFPHVERYFWTMVNQPNFKKVLGDVKQAESVPPVQKK 227
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 109 bits (263), Expect = 2e-24
Identities = 63/162 (38%), Positives = 93/162 (57%), Gaps = 4/162 (2%)
Frame = +1
Query: 118 ILYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGK 297
+L+ N A+KALIAA+Y+G V++ NF G +NK+ +FLK P GK+P E+ +G
Sbjct: 28 VLHCGSGNKNAFKALIAAEYTGVKVELTKNFEMGVSNKTPEFLKMNPLGKIPVLETPEGA 87
Query: 298 VLLTESNAIAYYVA----NESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQ 465
V ESNAIA YVA N SL G L + + QW +S +E+ W++P LG
Sbjct: 88 VF--ESNAIARYVARLKDNSSLCGSSLIDYSHIEQWMDFSATEVDANIGRWLYPRLGFGP 145
Query: 466 FNKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIV 591
+ E A + L +L L+ HL + T+LV +TLAD+++
Sbjct: 146 YVPVLEEFAITSLKRSLGALNTHLASNTYLVGHSVTLADIVM 187
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +2
Query: 602 LLHAFQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPK 757
L + F +L S S +V+R+F T+ +QP V+G + P K
Sbjct: 191 LYYGFVRILIKSFTSEFPHVERYFWTMVNQPNFKKVIGDFKQAESVPPVQKK 242
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 51.6 bits (118), Expect = 8e-07
Identities = 49/160 (30%), Positives = 73/160 (45%), Gaps = 12/160 (7%)
Frame = +1
Query: 160 LIAAQYSGTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 336
L+ + +G + VA + GE N+S L + P GK+PAFE DG+V L ES AI YV
Sbjct: 18 LVCLEEAGASYELVAVDMAAGE-NRSRHHLARSPFGKIPAFE--DGEVTLFESRAIQRYV 74
Query: 337 AN-----ESLRGGDLATQARVWQWASWSDSELLPA------SCAWVFPYLGIMQFNKQNV 483
+ LR G+L A V W PA C + P +G ++ V
Sbjct: 75 LRNYNKPDLLREGNLEESAMVDMWMEVEAHHYDPAIFHIIRECV-IKPMIGGGARDQAIV 133
Query: 484 ERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSYT 603
+ L L+V + L +L + +++AD+ F YT
Sbjct: 134 DENVEKLRKVLEVYERRLSESEYLAGDFVSVADLNHFPYT 173
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 51.6 bits (118), Expect = 8e-07
Identities = 45/164 (27%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Frame = +1
Query: 154 KALIAAQYSGTDVK-VAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAY 330
+ L+ + G D + V +F+ GE N S + +++ P GK+PA + DG ++L ES AIA
Sbjct: 17 RVLVCLEEVGADYELVTVDFLAGEQN-SPEHVERNPFGKIPALQ--DGDLVLFESRAIAK 73
Query: 331 YVAN-------ESLRGGDLATQARVWQWASWSDSELLPA------SCAWVFPYLGIMQFN 471
Y+ + LR D+ A V W + PA C +FP + + N
Sbjct: 74 YILRKYKSSKVDLLRESDIREAALVDVWTEVEAHQYYPALSPIVFECI-IFPIMRGVPTN 132
Query: 472 KQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSYT 603
+Q V + L L+ + L +L + ++ AD+ F +T
Sbjct: 133 QQVVHESLEKLKKVLETYEARLSGSRYLAGDFLSFADLNHFPFT 176
>01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932
Length = 219
Score = 49.6 bits (113), Expect = 3e-06
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 13/163 (7%)
Frame = +1
Query: 154 KALIAAQYSGTDVKVAP-NFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAY 330
+ L+ + G + +V +F E +KS + LK+ P G++PAF+ DG + L ES AI
Sbjct: 17 RVLLCLEEVGAEYEVVNVDFTVME-HKSPEHLKRNPFGQIPAFQ--DGDLYLFESRAIGK 73
Query: 331 YVAN-------ESLRGGDLATQARVWQWASWSDSELLPASCAWVF-----PYLGIMQFNK 474
Y+ + LR G+L A V W + A V+ P + + N+
Sbjct: 74 YILRKYKTREADLLREGNLREAAMVDVWTEVETHQYNSAISPIVYECIINPAMRGIPTNQ 133
Query: 475 QNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFSYT 603
+ V+ + L L+V + L T+L + ++ AD+ F YT
Sbjct: 134 KVVDESAEKLKKVLEVYEARLSQSTYLAGDFVSFADLNHFPYT 176
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 48.0 bits (109), Expect = 1e-05
Identities = 45/150 (30%), Positives = 62/150 (41%), Gaps = 10/150 (6%)
Frame = +1
Query: 181 GTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYVANE-SLRG 357
G D + P + +K FL P G++P + DG +L ES AI Y+A + G
Sbjct: 30 GLDFDLVPVDLRTAAHKQPHFLALNPFGQIPVLQ--DGDEVLYESRAINRYIATKYKAEG 87
Query: 358 GDL----ATQARVWQWASWSDSELLPASCAWVF-----PYLGIMQFNKQNVERAKSDLLA 510
DL A+ A++ W PA VF P LG + V+ + L
Sbjct: 88 ADLLPAEASPAKLEVWLEVESHHFYPAISGLVFQLLIKPLLGGAT-DTAAVDEHAAALAQ 146
Query: 511 ALKVLDGHLLTRTFLVTERITLADVIVFSY 600
L V D HL +L R +LAD SY
Sbjct: 147 VLDVYDAHLAGSRYLAGNRFSLADANHMSY 176
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 47.2 bits (107), Expect = 2e-05
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 9/170 (5%)
Frame = +1
Query: 112 PGILYTYPENFRAYKALIAAQYSGTDVKVAPNFVFGETNKSEDFLKKFPAGKVPAFESAD 291
P +Y + + L+ + G + +V P + +K + + P G+VPAFE D
Sbjct: 3 PAKVYGPAMSTNVMRILVCLEEVGAEYEVVPVDMSTGEHKRPPHISRNPFGQVPAFE--D 60
Query: 292 GKVLLTESNAIAYYV----ANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGI 459
G + L ES AI+ Y+ ++ LR +L+ A V W S A +F +
Sbjct: 61 GDLTLFESRAISKYILRKHGSDLLRESNLSESAMVDVWLEVESSHFDGAMSPIIFQCFIV 120
Query: 460 MQF-----NKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVF 594
F + V + L AL+V + L +L + I+LAD+ F
Sbjct: 121 PMFMGGATDIGVVNESLEKLKKALEVYEAQLSKSKYLAGDFISLADISHF 170
>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
Length = 221
Score = 45.2 bits (102), Expect = 7e-05
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Frame = +1
Query: 154 KALIAAQYSGTDVKVAPNFVFGET-NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAY 330
+ L+ + G D ++ + FG+ +K D L + P G+VPAF+ DG ++L ES AI
Sbjct: 17 RVLLCLEEVGADYEIV-DVDFGDREHKGPDHLARNPFGQVPAFQ--DGDLMLFESRAICR 73
Query: 331 YVANES--------LRGGDLATQARVWQWASWSDSELLPASCA-----WVFPYLGIMQFN 471
Y+ + LR GD + A V W P+ A V P LG + +
Sbjct: 74 YILRKHRATDEANLLREGDPSESAVVDAWLDVEALRYEPSVHAVFVQRRVVPALG-GEPD 132
Query: 472 KQNVERAKSDLLAALKVLDGHL-LTRTFLVTERITLADVIVFSYT 603
++ + + + L L V + L TR +L ++LAD+ F YT
Sbjct: 133 ERVIAESVARLRETLAVYEARLEATRGYLAGGEVSLADLSHFPYT 177
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 37.9 bits (84), Expect = 0.011
Identities = 37/136 (27%), Positives = 60/136 (44%), Gaps = 15/136 (11%)
Frame = +1
Query: 226 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV-------ANESLRG---GDLATQ 375
+KS FLK P G+VPAF+ D + ES AI Y+ N++L G +
Sbjct: 42 HKSPSFLKLQPFGQVPAFK--DSLTTVFESRAICRYICDQYADSGNKTLMGRKEDGAVGR 99
Query: 376 ARVWQWASWSDSELLPASCAWVF-----PYLGIMQFNKQNVERAKSDLLAALKVLDGHLL 540
A + +W P S A F P++G + VE+ ++ L+ L V + L
Sbjct: 100 AAIEKWIEAEGQSFNPPSLAMAFQLAFAPFMG-RATDMAVVEQNEAKLVKVLDVYEQWLG 158
Query: 541 TRTFLVTERITLADVI 588
+ + +LAD++
Sbjct: 159 ENQYFAGDEFSLADLV 174
>01_01_1176 -
9372879-9373097,9373814-9374278,9374372-9375447,
9375534-9375687,9375783-9375879,9376238-9376374
Length = 715
Score = 37.5 bits (83), Expect = 0.014
Identities = 17/37 (45%), Positives = 27/37 (72%)
Frame = +1
Query: 496 SDLLAALKVLDGHLLTRTFLVTERITLADVIVFSYTA 606
S+ AA LDG+L +RTFLV+ +++AD++V+S A
Sbjct: 93 SEFEAACSFLDGYLASRTFLVSYGLSIADIVVWSNLA 129
>10_06_0131 -
11066033-11066251,11066548-11067012,11067102-11068177,
11068269-11068422,11068511-11068601,11069016-11069152
Length = 713
Score = 35.1 bits (77), Expect = 0.075
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +1
Query: 496 SDLLAALKVLDGHLLTRTFLVTERITLADVIVFSYTA 606
S+ A +DG+L++RTFLV +T+AD+ V+S A
Sbjct: 91 SEFEVACSFVDGYLMSRTFLVGHVLTIADITVWSNLA 127
>02_04_0267 -
21430370-21430474,21430559-21430618,21430937-21431046,
21431220-21431295,21431541-21431594,21431935-21432006,
21432088-21432173,21432694-21432750,21432886-21432991
Length = 241
Score = 32.3 bits (70), Expect = 0.53
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +1
Query: 121 LYTYPENFRAYKALIAAQYSGTDVKV-APNFVFGETNKSEDFLKKFPAGKVPAFESADGK 297
LY+Y + +++ IA G + + A N + GE + E F+K P VPA DG
Sbjct: 16 LYSYWRSSCSHRVRIALNLKGLEYEYKAVNLLKGEHSDPE-FMKVNPMKFVPAL--VDGD 72
Query: 298 VLLTESNAIAYYVANE 345
++ +S AIA Y+ ++
Sbjct: 73 AVIGDSYAIALYLEDK 88
>02_05_1202 + 34932291-34933027,34933297-34933774
Length = 404
Score = 31.1 bits (67), Expect = 1.2
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +1
Query: 469 NKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIVFS 597
+++ + A +L AAL L+ HL +L + +TLADV +F+
Sbjct: 252 SQEAYDAAAGELFAALDRLEDHLSGSRYLCGDTLTLADVCLFT 294
>11_06_0584 - 25220371-25222917
Length = 848
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = -3
Query: 566 LSVTRKVRVRRCPSSTFKAASRSDFARSTFCLLNCMIPR*GKTQAQEAGSSSLSD 402
+++ + R R P + R + +ST C C +PR K +AG S+++D
Sbjct: 386 INIRKTARRRELPQKQHQHKLR--WTQSTICCCYCRVPRIMKATTADAGGSNIND 438
>06_01_0611 + 4420873-4422207
Length = 444
Score = 29.9 bits (64), Expect = 2.8
Identities = 17/35 (48%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Frame = +1
Query: 643 FVADKRSAL-----VPDRRPPATSVGRRRLAHALC 732
+V D+ +AL P RRPPA S RRRLA + C
Sbjct: 279 YVMDEHAALRVAVRTPKRRPPARSRSRRRLALSEC 313
>02_04_0633 - 24616563-24617279
Length = 238
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 317 MPSLTTLPMKVSAEEIWLPKPVSGSGHHGLTVNYC 421
MP+ TT+ M+ S + W P+ G HG VN+C
Sbjct: 1 MPAATTIQMEASPADHWSPRHRRRCGCHG--VNWC 33
>10_08_0710 + 20070655-20070990,20071074-20071469
Length = 243
Score = 29.5 bits (63), Expect = 3.7
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Frame = +1
Query: 226 NKSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV------ANESLRGGDLATQARVW 387
NKSE L P K +GK + ES I YV A ESL D +A
Sbjct: 45 NKSELLLSSNPVHKKVPVLIHNGKPIC-ESQIIVEYVDEAFPDAGESLLPSDPYDRAVAR 103
Query: 388 QWASWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAALKVLD 528
WA++ + + +P AW LG+ + K A +LAA++ L+
Sbjct: 104 FWAAYINDKFMP---AWQKASLGLTEEEK---AEAVKQMLAAIENLE 144
>10_08_0313 - 16677849-16679060,16679158-16679244,16679749-16680111
Length = 553
Score = 29.5 bits (63), Expect = 3.7
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +2
Query: 539 SHAPSLLPRESHLPMSLSSVT--LLHAFQHVLDPSVRSSL 652
+H PSL+P ESHL S+SS LL H D SL
Sbjct: 498 NHQPSLVPNESHLNNSVSSTADGLLMEAAHQRDTQGSDSL 537
>01_01_0735 + 5730783-5733320
Length = 845
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 201 TEFRIWRDQQVRRLLEEVSCRKSACIRKCRWKSA 302
T F +W D + + +E SC+K C+ C K+A
Sbjct: 372 TYFHLWGDSRGAPMTDEESCKKD-CLSNCSCKAA 404
>05_01_0123 -
846081-846167,846264-846404,846749-846866,847382-847528,
848439-848441,848590-848627,848808-848851,848959-849016
Length = 211
Score = 28.7 bits (61), Expect = 6.5
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +1
Query: 241 FLKKFPAGKVPAFESADGK 297
FLK P GKVP F DGK
Sbjct: 49 FLKISPEGKVPVFNGGDGK 67
>05_04_0124 + 18232961-18236636,18236810-18237288,18237549-18237629,
18238033-18238041,18238096-18238248
Length = 1465
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 97 LQPWRPGILYTYPENF 144
+Q WRPG+L TY E+F
Sbjct: 1414 IQIWRPGVLKTYHESF 1429
>05_04_0122 + 18198594-18202269,18202551-18202591,18203273-18203281,
18203336-18203551,18204257-18204361,18204761-18204919
Length = 1401
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +1
Query: 97 LQPWRPGILYTYPENF 144
+Q WRPG+L TY E+F
Sbjct: 1241 IQIWRPGVLKTYHESF 1256
>04_04_1247 -
32043776-32043880,32044296-32044505,32044595-32045101,
32045362-32045583,32046054-32046184,32046737-32047745,
32047830-32047904,32047995-32048066,32048153-32048328,
32048494-32048646,32048739-32049234
Length = 1051
Score = 28.3 bits (60), Expect = 8.6
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = -3
Query: 554 RKVRVRRCPSSTFKAASRSDFARSTFCLLNCMIPR*GKTQAQEAGSSSLS 405
+K RVR PSST ++A+RS C + + + A+ SS LS
Sbjct: 425 KKARVRPSPSSTLRSANRSTAGTLVVCPASVLRQWASELAAKVTESSKLS 474
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,667,504
Number of Sequences: 37544
Number of extensions: 598387
Number of successful extensions: 1921
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1916
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -