Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_N16
(850 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 31 0.21
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 31 0.21
SPCC550.11 |||karyopherin|Schizosaccharomyces pombe|chr 3|||Manual 31 0.27
SPAC17H9.04c |||RNA-binding protein|Schizosaccharomyces pombe|ch... 31 0.27
SPBP23A10.02 |||conserved fungal protein|Schizosaccharomyces pom... 29 0.63
SPAC23H3.15c ||SPAC25H1.01c|sequence orphan|Schizosaccharomyces ... 29 0.63
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 29 1.1
SPAC17G6.11c |||glucosidase |Schizosaccharomyces pombe|chr 1|||M... 28 1.5
SPBC13G1.08c |ash2||Ash2-trithorax family protein|Schizosaccharo... 28 1.9
SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 28 1.9
SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pomb... 27 2.5
SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9 |Schizos... 27 3.4
SPAC6F6.12 |||autophagy associated protein Atg24|Schizosaccharom... 27 4.4
SPBC1826.01c |mot1||TATA-binding protein associated factor Mot1|... 27 4.4
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 27 4.4
SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase Cdc... 27 4.4
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 26 5.9
SPAC20G8.08c |fft1||fun thirty related protein Fft1|Schizosaccha... 26 5.9
SPCC18B5.08c |||isoleucine-tRNA ligase|Schizosaccharomyces pombe... 26 5.9
SPAC29B12.06c |rcd1||RNA-binding protein Rcd1 |Schizosaccharomyc... 26 7.8
SPAC9E9.02 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual 26 7.8
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 31.1 bits (67), Expect = 0.21
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Frame = +3
Query: 504 LDNAHSSLLSNAQYSTQAINRNS-HYSNSQFSNSNYRNSHRASPSQSQHISDLQASDGSQ 680
L SS L ++ + N NS +Y+N+ N+N ++ +S Q S L +S G+
Sbjct: 549 LSGMASSFLGSSGNNNNNNNSNSGNYNNNNSGNNNQQHQQSSSSLQGLASSFLNSSSGNS 608
Query: 681 GYQQFDYGGQAAAAEIYSKSNGRVASDRYSNDQNAYDQYNSK 806
Q ++ + Y +N + Y+N+ N+ NS+
Sbjct: 609 NKQNYNNNNN----QNYGNNN----NQNYNNNNNSSQGGNSQ 642
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 31.1 bits (67), Expect = 0.21
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 567 NSHYSNSQFSNSNYRNSHRASPSQSQHISDLQASDGSQGYQQFDY 701
NS Y + S+ + NS+R S S SQ +L S Q Q DY
Sbjct: 405 NSLYPVNNTSSEQHHNSYRGSVSNSQPSGNLSESTNLQPVQPVDY 449
>SPCC550.11 |||karyopherin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1029
Score = 30.7 bits (66), Expect = 0.27
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +1
Query: 160 LPHYRHWLW--PNLNFIKKKKTFTILEVRRTKVASLDFMVRKEETWGVIMNVLTTWIHLL 333
LP + W P+ + KK + + + + V +++WG IM V+ T ++ L
Sbjct: 827 LPFFALWFENIPSFTRVHDKKLSLVAILSVISLGAQQVAVAIQDSWGNIMKVMITLLNTL 886
Query: 334 KDI*AARSHKLKE 372
+ AAR+ KE
Sbjct: 887 PEALAARAELEKE 899
>SPAC17H9.04c |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 604
Score = 30.7 bits (66), Expect = 0.27
Identities = 30/118 (25%), Positives = 46/118 (38%), Gaps = 5/118 (4%)
Frame = +3
Query: 465 SNLRGRNFQEGTYLDNAHSSLLSNAQYSTQAINRNSHYSNSQFSNSNYR-NSHRASPSQS 641
SN +F G N S ++N S N N+ S+ Q N N N H +S S
Sbjct: 380 SNTFSPDFPYGNSYGNGSSHFIANYGGSVHHSNENTMQSDLQHQNGNNAVNHHHSSRSFG 439
Query: 642 QHISDLQASD---GSQGYQQFDYGGQAAAAEI-YSKSNGRVASDRYSNDQNAYDQYNS 803
++ +A D GS+G ++ S++ V +D S N +NS
Sbjct: 440 GNV-PFRAGDWKCGSEGCGYHNFAKNVCCLRCGASRATAAVVADHASGPVNGSYSHNS 496
>SPBP23A10.02 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 132
Score = 29.5 bits (63), Expect = 0.63
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = +3
Query: 513 AHSSLLSNAQYSTQAINRNSHYSNSQFSNSNYRNSHRASPS 635
AH+ + ++ Q S+Q+ N+N SN+Q ++N S + S S
Sbjct: 69 AHARVNNDLQMSSQSANKNDDNSNNQNPSNNKEMSDKESDS 109
Score = 27.1 bits (57), Expect = 3.4
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 567 NSHYSNSQFSNSNYRNSHRASPSQSQHISDLQASDGSQGYQQF 695
N +SQ +N N NS+ +PS ++ +SD + SD + Q F
Sbjct: 75 NDLQMSSQSANKNDDNSNNQNPSNNKEMSD-KESDSATTTQTF 116
>SPAC23H3.15c ||SPAC25H1.01c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 325
Score = 29.5 bits (63), Expect = 0.63
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +3
Query: 369 GELGEEGSKTRT-GSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNAHSSLLSNAQ 542
G G + + +T G+V +A S YG G Y N + T NA ++ NAQ
Sbjct: 221 GSYGNDNTANKTRGAVSSAGYSGEGYGKGTYATDTTAEANRRAATGTRNARTTAQRNAQ 279
Score = 28.3 bits (60), Expect = 1.5
Identities = 27/108 (25%), Positives = 42/108 (38%)
Frame = +3
Query: 480 RNFQEGTYLDNAHSSLLSNAQYSTQAINRNSHYSNSQFSNSNYRNSHRASPSQSQHISDL 659
R + +Y N +S+ N YS+ N + S ++ R AS QSQ+
Sbjct: 104 RRHDDSSYSSNKYSTG-GNDSYSSGGRNEDYSTSGGSYTTDPSRTDDTASYGQSQYNQSR 162
Query: 660 QASDGSQGYQQFDYGGQAAAAEIYSKSNGRVASDRYSNDQNAYDQYNS 803
+ + G Y + DY Q+ + Y SD AYD +S
Sbjct: 163 KTTQGGD-YGE-DY-SQSYPTDTYGSRQKATPSDTVGG--GAYDYSSS 205
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 28.7 bits (61), Expect = 1.1
Identities = 33/152 (21%), Positives = 58/152 (38%), Gaps = 6/152 (3%)
Frame = +3
Query: 354 ISQVEGELGEEGSKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNA-----H 518
I + + +L E+ S+ RT S F N +L ++ +E N H
Sbjct: 1412 IQRSDSKLREDQSRDRT------PQSRSFTNENNDNLRSVSRHTRREPQQAQNLNARREH 1465
Query: 519 SSLLSNAQYSTQAINRNSHYSNSQFSNSNYRNSHRASPSQSQHISDLQASDGSQGYQQFD 698
S S+ +NRN SN+ +N + S A+ S + ++G ++ D
Sbjct: 1466 ESQKSDRWRQNGNVNRNPRVSNNNSTNVSRERSSEANHRTSNDNKRDEVTEGKDKNKRQD 1525
Query: 699 YGGQAAAAEIYSKSN-GRVASDRYSNDQNAYD 791
G++ + + + S GR ND D
Sbjct: 1526 ISGESNSRQNNAISRAGRSNGSNRGNDSRDAD 1557
>SPAC17G6.11c |||glucosidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 636
Score = 28.3 bits (60), Expect = 1.5
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +3
Query: 507 DNAHSSLLSNAQYSTQAINRNSHYSNSQFSNSNYRNSHRASPSQSQHISDLQASDGSQGY 686
D + SS + ST+ + N+ SN+ FS++ + + S + SQ Y
Sbjct: 29 DTSTSSFTNPTDSSTRLLYNNA--SNATFSSAALAAGVGGTRA-SGYTHRFSIRPSSQTY 85
Query: 687 QQFDYGGQAAAAEIYSKS--NGRVASD 761
++ GG +A +++YS S N + D
Sbjct: 86 NRYPNGGNSAGSDMYSTSPQNNSIVDD 112
>SPBC13G1.08c |ash2||Ash2-trithorax family
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 652
Score = 27.9 bits (59), Expect = 1.9
Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 11/83 (13%)
Frame = +3
Query: 576 YSNSQFSNSNYRNSHRASPSQSQHISDLQASDGSQGY-----------QQFDYGGQAAAA 722
Y N + + + N +P S + + DGS GY +F +G Q +
Sbjct: 528 YKNGSYMGTAFENLLDFNPPNSINSNHYSFDDGSLGYYPSISMYGGGIARFQFGPQFSHR 587
Query: 723 EIYSKSNGRVASDRYSNDQNAYD 791
+ SN R S+RY N+Q A D
Sbjct: 588 PLVLGSNVRPVSERY-NEQIAED 609
>SPAC12B10.10 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 419
Score = 27.9 bits (59), Expect = 1.9
Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +3
Query: 561 NRNSHYSNSQFSN-SNYRNSHRASPSQSQHISDLQA 665
NR S + NSQ+S +N++N+ SP+ S + LQA
Sbjct: 234 NRVSSFQNSQYSTLNNFQNNSNQSPN-SNDLQPLQA 268
>SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1919
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 687 DNLVSHLKLVGHLYVVTEMEMHDDYF 610
DN++ K HLY+ T +E + D+F
Sbjct: 1055 DNIIHVYKCYQHLYLFTPLETNSDFF 1080
>SPBC32H8.10 |cdk9||cyclin-dependent protein kinase Cdk9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 591
Score = 27.1 bits (57), Expect = 3.4
Identities = 29/128 (22%), Positives = 56/128 (43%), Gaps = 4/128 (3%)
Frame = +3
Query: 276 QRGNM---GGNYERAHNMDSLAQRHLSGAISQVEGELGEEGSK-TRTGSVYTAANSAGFY 443
QRG+ GGN +R+ N++ +R + + +L ++ S+ + T ++ +N +
Sbjct: 412 QRGSYNREGGNMDRSRNVNYQPKRQQN--FKPLTSDLPQKNSEFSETNAMNQTSNHSHAD 469
Query: 444 GSGNYDLSNLRGRNFQEGTYLDNAHSSLLSNAQYSTQAINRNSHYSNSQFSNSNYRNSHR 623
G Y R + + + D S+ Q A N +S Y N+ + R S
Sbjct: 470 GQRYYRPEQDRSQRLRNPS--DYGRQGRQSS-QSQQPAWNVSSRYQNNSKVQTTSRASEN 526
Query: 624 ASPSQSQH 647
A +++QH
Sbjct: 527 ADTNKTQH 534
>SPAC6F6.12 |||autophagy associated protein
Atg24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 401
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 310 LTTWIHLLKDI*AARSHKLKESWARRDQKPERV 408
LT + +KD+ + +H LKE RRDQK + V
Sbjct: 253 LTLLLDTIKDV-ESYAHSLKELLKRRDQKQQDV 284
>SPBC1826.01c |mot1||TATA-binding protein associated factor
Mot1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1953
Score = 26.6 bits (56), Expect = 4.4
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +3
Query: 462 LSNLRGRNFQEGTYLDNAHSSLLSNAQYSTQAINRNSHYSNSQFSNSNYRNSHRASPSQS 641
LSNL+ R G YLD++ + L + S + + + S +N + +PS++
Sbjct: 216 LSNLKSRLDLAGEYLDDSIMNDLGDNVGSNSKGSPTTSIPEHKTSINNNKPEDTPTPSEN 275
Query: 642 QHISDLQ 662
H+S Q
Sbjct: 276 VHLSARQ 282
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 26.6 bits (56), Expect = 4.4
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = +3
Query: 459 DLSNLRGRNFQEGTYLDNAHSSLLSNAQYSTQAINRNSHYSNSQFSNSNYRN 614
+++N+ RNFQ G + + SSL +N Q A N ++ +N N+N N
Sbjct: 264 NIANM-ARNFQSGGGMPDL-SSLANNPQLQNLARNFMNNNNNGNTDNNNQGN 313
>SPBC21.06c |cdc7|pld1, its10|serine/threonine protein kinase
Cdc7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1062
Score = 26.6 bits (56), Expect = 4.4
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +3
Query: 507 DNAHSSLLSNAQYSTQAINRNSHYSN--SQFSNSNYRNSHRASPSQSQH 647
DN + + S + ++ H+ + S F N +S +SPS+S+H
Sbjct: 327 DNWDNEFQGTLKISDDVLKKSEHFMDFCSNFKGKNNSSSITSSPSKSRH 375
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 26.2 bits (55), Expect = 5.9
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +3
Query: 519 SSLLSNAQYSTQAINRNSHYSNSQFSNSNYRNSHRASPSQSQHISDLQASDGS 677
SSLLS S + S S Q ++++ +S SPS S S + + GS
Sbjct: 337 SSLLSLLTQSFSTVRSTSSSSTDQLTSASPISSSVISPSVSSPTSSILTNSGS 389
>SPAC20G8.08c |fft1||fun thirty related protein
Fft1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 944
Score = 26.2 bits (55), Expect = 5.9
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -2
Query: 711 LDLRNQIVDNL-VSHLKLVGHLYVVTEMEMHDDYFDNSNY 595
LD+ +++ L + L+L G V T ++ DD+ N NY
Sbjct: 793 LDILEYVLNTLDLEFLRLDGSTPVETRQQLIDDFHTNENY 832
>SPCC18B5.08c |||isoleucine-tRNA ligase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 26.2 bits (55), Expect = 5.9
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = +3
Query: 372 ELGEEGSKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNAHSSLLSNAQYST 551
++GE K R S + N + S + D+ LRG + LD + + Y +
Sbjct: 679 QVGESLKKWRLTSRFCLGNLHDWNTSSSVDVGELRGIDKLALVQLDKFQTEI--RELYES 736
Query: 552 QAINRNSHYSNSQFSNS 602
+IN+ H+ N F NS
Sbjct: 737 YSINKVVHHLN-YFMNS 752
>SPAC29B12.06c |rcd1||RNA-binding protein Rcd1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 283
Score = 25.8 bits (54), Expect = 7.8
Identities = 21/77 (27%), Positives = 38/77 (49%)
Frame = +1
Query: 94 ILSFISTLKCLDKSKP*DDYFCLPHYRHWLWPNLNFIKKKKTFTILEVRRTKVASLDFMV 273
+ + ++ L+C+ +F H +L+P LN + K K F L R T + + +V
Sbjct: 82 VCNALALLQCIASHPETRIHFLNAHITLFLYPFLNTLSKSKPFEYL--RLTSLGVIGALV 139
Query: 274 RKEETWGVIMNVLTTWI 324
K ++ VI +L+T I
Sbjct: 140 -KNDSPEVINFLLSTEI 155
>SPAC9E9.02 |||dubious|Schizosaccharomyces pombe|chr 1|||Manual
Length = 98
Score = 25.8 bits (54), Expect = 7.8
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -2
Query: 327 VNPCCEHVHNYPPCFLFAHHKIQTCYLRPTNF*NSESLLFLYKV 196
+NPC N+ + KI+ L T+F ++E++ FLY +
Sbjct: 49 LNPC-----NFSKSLFWLRKKIKNSVLLKTSFDSNETIFFLYSL 87
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,090,467
Number of Sequences: 5004
Number of extensions: 63470
Number of successful extensions: 258
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 255
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 420459900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -