Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_N16
(850 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0257 + 28719980-28720220,28721412-28721455,28722521-287225... 33 0.22
03_01_0471 + 3629158-3629185,3630027-3630058,3630272-3630344,363... 33 0.38
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69... 32 0.50
02_04_0374 - 22455844-22455961,22456056-22456777,22456977-22457552 32 0.66
02_01_0041 + 279583-281622,281724-282047,282315-282443,282526-28... 30 2.7
02_03_0218 + 16526082-16526375,16526606-16526725,16528078-165282... 29 6.2
04_01_0069 - 697811-697876,697956-698166,698265-698359,698448-69... 28 8.2
03_01_0452 - 3465140-3466404,3466481-3467056,3467150-3467495 28 8.2
>05_07_0257 +
28719980-28720220,28721412-28721455,28722521-28722590,
28722693-28722816,28723420-28724060,28725100-28725364,
28725434-28725713,28726042-28726209,28726867-28727358,
28727432-28727689
Length = 860
Score = 33.5 bits (73), Expect = 0.22
Identities = 28/120 (23%), Positives = 47/120 (39%)
Frame = +3
Query: 312 HNMDSLAQRHLSGAISQVEGELGEEGSKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQ 491
+N DS + ++S Q E + E K+++ A N D ++L +F
Sbjct: 371 NNRDS--EGNMSATDKQFEQLILHEEKKSKSSEDNPAVIIPDHLQVSNADCAHLTFGSFV 428
Query: 492 EGTYLDNAHSSLLSNAQYSTQAINRNSHYSNSQFSNSNYRNSHRASPSQSQHISDLQASD 671
GT LD S +N A++ N S Y N +P+ +H++ SD
Sbjct: 429 SGT-LDAPVSLKTANGDEEVAAVSDNHSIDQSDVRIHEYENKDTVAPAADEHVASSTKSD 487
>03_01_0471 +
3629158-3629185,3630027-3630058,3630272-3630344,
3630745-3630969,3631319-3631789,3632286-3633118
Length = 553
Score = 32.7 bits (71), Expect = 0.38
Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 12/124 (9%)
Frame = +3
Query: 327 LAQRHLSGAISQVEGELGEEGSKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYL 506
+++R S +IS++ G S S +T + + S N DLSN+ R ++L
Sbjct: 342 ISRRPSSQSISRIYAASGTPNSPNPIRS-FTNSTAMSISRS-NVDLSNMSSR--PRASHL 397
Query: 507 DNAHS---SLLS---NAQYSTQAINRNS------HYSNSQFSNSNYRNSHRASPSQSQHI 650
+AHS S LS N +Y++ ++ + H S+S SNS Y +S S SQH
Sbjct: 398 ASAHSLVGSHLSPPINIRYASPHMSHSGYASPSPHVSSSYVSNSGYGSSSYYLGSSSQHR 457
Query: 651 SDLQ 662
S L+
Sbjct: 458 SYLR 461
>03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-693320,
693391-693518,693951-694010,694113-694163,694704-694821,
694990-695915,695916-697707,697810-697943,698029-698526
Length = 1774
Score = 32.3 bits (70), Expect = 0.50
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = +3
Query: 519 SSLLSNAQYSTQAIN-RNSHYSNSQFSNSNYRNSHRASPSQSQHISDLQASDGSQGYQQF 695
+SL +ST ++ ++++ SNSQ + SP SDL D QG +
Sbjct: 871 NSLDDRLSHSTDSVPPKDANASNSQAMCQIKHSGSLPSPGSPHQRSDLH-HDEVQGGRSG 929
Query: 696 DYGGQAAAAEIYSKSNGRVASDRYSNDQNAYDQYNS 803
++ Q + E++S S + +S +SN ++ +D Y S
Sbjct: 930 EWNNQHNS-ELWSPSMPQTSSSAHSNVESHHDHYPS 964
>02_04_0374 - 22455844-22455961,22456056-22456777,22456977-22457552
Length = 471
Score = 31.9 bits (69), Expect = 0.66
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Frame = +3
Query: 528 LSNAQYSTQAINRN-SHYSNSQFSNSNYRNSHRASPSQSQHISDLQASDGSQGYQQFDYG 704
++ A + + I N S +N+ S++ + H A+ + + +S + +DG G +QF+
Sbjct: 201 VATASKTDELITSNVSSINNTNGSSATISDRHDATAALDKPMSTAETTDGLIGSKQFNEV 260
Query: 705 GQAAAA--EIYSKSNGRVASDRYSND 776
G A A + S S+ V SND
Sbjct: 261 GTAEAMPDALTSSSSSEVQPSEKSND 286
>02_01_0041 +
279583-281622,281724-282047,282315-282443,282526-282648,
282768-282923,283224-283349,283426-283560,283815-283942,
284037-284148,284233-284547,284655-284771,284871-285166,
285252-285783,287980-288082,288808-288881,288965-289062,
289340-289380,289977-290032,290170-290244,290377-290469,
290602-290850,290930-291002,291681-291766,291853-291938,
292067-292142,292280-292347,292430-292496,292570-292665,
292741-292843,293214-293309,293396-293466
Length = 2047
Score = 29.9 bits (64), Expect = 2.7
Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Frame = +3
Query: 507 DNAHSSLLSNAQYSTQAINRNSHYSNSQFSNSNYRNSHRASPSQSQHISDLQASDGSQ-G 683
++ +SS S ++T A SHY N +S+ + + AS Q + G Q G
Sbjct: 388 ESFNSSTNSQVSFNT-AETATSHYGNVNLDSSSTQGGYTASGGQQTGYKGFEPFTGHQAG 446
Query: 684 YQQFDYG-GQAAAAEIYSKSNGRVASDRYSNDQNAYDQY 797
Y+ F+ G + +++ S G S + + Q+
Sbjct: 447 YKGFEPSTGHQTSHKLFDPSAGNQNSYKPFEPSTGHHQH 485
>02_03_0218 +
16526082-16526375,16526606-16526725,16528078-16528238,
16528601-16528634,16529296-16529398,16529784-16529963,
16530726-16530742
Length = 302
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Frame = +3
Query: 336 RHLSGAISQVEGELGEEGSKTRT--GSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYLD 509
R + A +E G+ S+ R S Y N +GS + D GR+F+
Sbjct: 235 RERAFAPMNMENNFGQHDSRFRNRHDSNYAPRNMENKFGSNDSDFGTQSGRSFRHDPSFR 294
Query: 510 NAHSS 524
N H S
Sbjct: 295 NQHGS 299
>04_01_0069 -
697811-697876,697956-698166,698265-698359,698448-698513,
698595-698643,698720-698770,698856-698908,699263-699331,
699874-699928,700011-700099,700217-700302,700376-700432,
700575-700716,701637-702032
Length = 494
Score = 28.3 bits (60), Expect = 8.2
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Frame = +3
Query: 465 SNLRGRNFQEGTYLDNAHSSL-------LSNAQYSTQAINRNSHYSNSQFSNSNYRNSHR 623
S L N GTY++ +L L N + Q + R++ F SN++ +
Sbjct: 351 STLIAVNAPRGTYIEVPDPNLDMDIYKDLDNQEKHYQIVFRSAMGPVDCFLISNHQETFN 410
Query: 624 ASPSQSQHISDLQASDGSQGYQQFDYGGQAAAAEIYSKSNG 746
A + ++ S SQ QQ DY A+EI +SNG
Sbjct: 411 ADQQMADNLDAAVTSGSSQAPQQMDY---VQASEI-GESNG 447
>03_01_0452 - 3465140-3466404,3466481-3467056,3467150-3467495
Length = 728
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/50 (32%), Positives = 20/50 (40%)
Frame = +3
Query: 261 GFYGAQRGNMGGNYERAHNMDSLAQRHLSGAISQVEGELGEEGSKTRTGS 410
G R N GG Y+ NM L H SG V + +E +GS
Sbjct: 605 GMSSTDRHNFGGTYDSLQNMSVLHPEHWSG--EPVSSQQIDENQSVDSGS 652
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,960,081
Number of Sequences: 37544
Number of extensions: 406931
Number of successful extensions: 1171
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1171
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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