Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_N16
(850 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X98893-1|CAA67398.1| 589|Homo sapiens hTAFII68 protein. 36 0.25
AY197697-1|AAO13485.1| 589|Homo sapiens TAF15 RNA polymerase II... 36 0.25
AB010067-2|BAA33812.1| 589|Homo sapiens RBP56/hTAFII68 protein. 36 0.25
U51334-1|AAC50932.1| 592|Homo sapiens putative RNA binding prot... 34 0.75
BC046099-1|AAH46099.2| 592|Homo sapiens TAF15 RNA polymerase II... 34 0.75
AB010067-1|BAA33811.1| 592|Homo sapiens RBP56/hTAFII68 protein. 34 0.75
BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein. 33 1.7
AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein. 33 1.7
AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor p... 33 1.7
AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor p... 33 1.7
X77366-1|CAA54555.1| 772|Homo sapiens hbZ17 protein. 32 2.3
U08853-1|AAA20466.1| 447|Homo sapiens transcription factor LCR-... 32 2.3
BC010623-1|AAH10623.1| 742|Homo sapiens NFE2L1 protein protein. 32 2.3
AK090459-1|BAC03440.1| 791|Homo sapiens FLJ00380 protein protein. 32 2.3
M95586-1|AAA58445.1| 574|Homo sapiens E2A/HLF fusion protein pr... 32 3.0
M31523-1|AAA61146.1| 654|Homo sapiens TCF3 protein. 32 3.0
M31222-1|AAA52331.1| 648|Homo sapiens TCF3 protein. 32 3.0
BC110579-1|AAI10580.1| 651|Homo sapiens TCF3 protein protein. 32 3.0
BC075798-1|AAH75798.1| 1222|Homo sapiens GPR126 protein protein. 32 3.0
AY181244-1|AAO27356.1| 541|Homo sapiens G protein-coupled recep... 32 3.0
AF216967-1|AAO13250.1| 1222|Homo sapiens putative vascular induc... 32 3.0
AC005321-2|AAC27373.1| 606|Homo sapiens TFE2_HUMAN protein. 32 3.0
AB183549-1|BAD27574.1| 1222|Homo sapiens developmentally regulat... 32 3.0
AB183548-1|BAD27573.1| 1250|Homo sapiens developmentally regulat... 32 3.0
AK056681-1|BAB71252.1| 600|Homo sapiens protein ( Homo sapiens ... 31 5.3
BC020264-1|AAH20264.1| 406|Homo sapiens HERPUD family member 2 ... 30 9.2
BC005091-1|AAH05091.1| 406|Homo sapiens HERPUD2 protein protein. 30 9.2
>X98893-1|CAA67398.1| 589|Homo sapiens hTAFII68 protein.
Length = 589
Score = 35.5 bits (78), Expect = 0.25
Identities = 35/145 (24%), Positives = 58/145 (40%), Gaps = 1/145 (0%)
Frame = +3
Query: 369 GELGEEGSKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNAHSSLLSNAQYS 548
G G+ G + ++ S Y S G YG + S G+ + +Y N +S S Q
Sbjct: 5 GSYGQSGGEQQSYSTYGNPGSQG-YGQASQSYSGY-GQT-TDSSYGQN-YSGYSSYGQSY 60
Query: 549 TQAINRNSHYSNSQFSNSNYRNSHRASPSQSQHISDLQASDG-SQGYQQFDYGGQAAAAE 725
+Q+ + S +S Y N Q Q++ + G + Y Q DYG Q + +
Sbjct: 61 SQSYGGYENQKQSSYSQQPYNNQ-----GQQQNMESSGSQGGRAPSYDQPDYGQQDSYDQ 115
Query: 726 IYSKSNGRVASDRYSNDQNAYDQYN 800
+ + D SN +D Y+
Sbjct: 116 QSGYDQHQGSYDEQSNYDQQHDSYS 140
>AY197697-1|AAO13485.1| 589|Homo sapiens TAF15 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 68kD
protein.
Length = 589
Score = 35.5 bits (78), Expect = 0.25
Identities = 35/145 (24%), Positives = 58/145 (40%), Gaps = 1/145 (0%)
Frame = +3
Query: 369 GELGEEGSKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNAHSSLLSNAQYS 548
G G+ G + ++ S Y S G YG + S G+ + +Y N +S S Q
Sbjct: 5 GSYGQSGGEQQSYSTYGNPGSQG-YGQASQSYSGY-GQT-TDSSYGQN-YSGYSSYGQSY 60
Query: 549 TQAINRNSHYSNSQFSNSNYRNSHRASPSQSQHISDLQASDG-SQGYQQFDYGGQAAAAE 725
+Q+ + S +S Y N Q Q++ + G + Y Q DYG Q + +
Sbjct: 61 SQSYGGYENQKQSSYSQQPYNNQ-----GQQQNMESSGSQGGRAPSYDQPDYGQQDSYDQ 115
Query: 726 IYSKSNGRVASDRYSNDQNAYDQYN 800
+ + D SN +D Y+
Sbjct: 116 QSGYDQHQGSYDEQSNYDQQHDSYS 140
>AB010067-2|BAA33812.1| 589|Homo sapiens RBP56/hTAFII68 protein.
Length = 589
Score = 35.5 bits (78), Expect = 0.25
Identities = 35/145 (24%), Positives = 58/145 (40%), Gaps = 1/145 (0%)
Frame = +3
Query: 369 GELGEEGSKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNAHSSLLSNAQYS 548
G G+ G + ++ S Y S G YG + S G+ + +Y N +S S Q
Sbjct: 5 GSYGQSGGEQQSYSTYGNPGSQG-YGQASQSYSGY-GQT-TDSSYGQN-YSGYSSYGQSY 60
Query: 549 TQAINRNSHYSNSQFSNSNYRNSHRASPSQSQHISDLQASDG-SQGYQQFDYGGQAAAAE 725
+Q+ + S +S Y N Q Q++ + G + Y Q DYG Q + +
Sbjct: 61 SQSYGGYENQKQSSYSQQPYNNQ-----GQQQNMESSGSQGGRAPSYDQPDYGQQDSYDQ 115
Query: 726 IYSKSNGRVASDRYSNDQNAYDQYN 800
+ + D SN +D Y+
Sbjct: 116 QSGYDQHQGSYDEQSNYDQQHDSYS 140
>U51334-1|AAC50932.1| 592|Homo sapiens putative RNA binding protein
RBP56 protein.
Length = 592
Score = 33.9 bits (74), Expect = 0.75
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 6/150 (4%)
Frame = +3
Query: 369 GELGEEGSKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNAHSSLLSNAQYS 548
G G+ G + ++ S Y S G YG + S G D+++ S YS
Sbjct: 5 GSYGQSGGEQQSYSTYGNPGSQG-YGQASQSYSGY-------GQTTDSSYGQNYSG--YS 54
Query: 549 TQAINRNSHYSNSQFSNSNYR-NSHRASPSQSQHISDLQASDGSQG-----YQQFDYGGQ 710
+ ++ S YS S N + +S+ P +Q S GSQG Y Q DYG Q
Sbjct: 55 SYGQSQ-SGYSQSYGGYENQKQSSYSQQPYNNQGQQQNMESSGSQGGRAPSYDQPDYGQQ 113
Query: 711 AAAAEIYSKSNGRVASDRYSNDQNAYDQYN 800
+ + + + D SN +D Y+
Sbjct: 114 DSYDQQSGYDQHQGSYDEQSNYDQQHDSYS 143
>BC046099-1|AAH46099.2| 592|Homo sapiens TAF15 RNA polymerase II,
TATA box binding protein (TBP)-associated factor, 68kD
protein.
Length = 592
Score = 33.9 bits (74), Expect = 0.75
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 6/150 (4%)
Frame = +3
Query: 369 GELGEEGSKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNAHSSLLSNAQYS 548
G G+ G + ++ S Y S G YG + S G D+++ S YS
Sbjct: 5 GSYGQSGGEQQSYSTYGNPGSQG-YGQASQSYSGY-------GQTTDSSYGQNYSG--YS 54
Query: 549 TQAINRNSHYSNSQFSNSNYR-NSHRASPSQSQHISDLQASDGSQG-----YQQFDYGGQ 710
+ ++ S YS S N + +S+ P +Q S GSQG Y Q DYG Q
Sbjct: 55 SYGQSQ-SGYSQSYGGYENQKQSSYSQQPYNNQGQQQNMESSGSQGGRAPSYDQPDYGQQ 113
Query: 711 AAAAEIYSKSNGRVASDRYSNDQNAYDQYN 800
+ + + + D SN +D Y+
Sbjct: 114 DSYDQQSGYDQHQGSYDEQSNYDQQHDSYS 143
>AB010067-1|BAA33811.1| 592|Homo sapiens RBP56/hTAFII68 protein.
Length = 592
Score = 33.9 bits (74), Expect = 0.75
Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 6/150 (4%)
Frame = +3
Query: 369 GELGEEGSKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNAHSSLLSNAQYS 548
G G+ G + ++ S Y S G YG + S G D+++ S YS
Sbjct: 5 GSYGQSGGEQQSYSTYGNPGSQG-YGQASQSYSGY-------GQTTDSSYGQNYSG--YS 54
Query: 549 TQAINRNSHYSNSQFSNSNYR-NSHRASPSQSQHISDLQASDGSQG-----YQQFDYGGQ 710
+ ++ S YS S N + +S+ P +Q S GSQG Y Q DYG Q
Sbjct: 55 SYGQSQ-SGYSQSYGGYENQKQSSYSQQPYNNQGQQQNMESSGSQGGRAPSYDQPDYGQQ 113
Query: 711 AAAAEIYSKSNGRVASDRYSNDQNAYDQYN 800
+ + + + D SN +D Y+
Sbjct: 114 DSYDQQSGYDQHQGSYDEQSNYDQQHDSYS 143
>BC057783-1|AAH57783.1| 275|Homo sapiens SFRS2B protein protein.
Length = 275
Score = 32.7 bits (71), Expect = 1.7
Identities = 30/105 (28%), Positives = 45/105 (42%), Gaps = 5/105 (4%)
Frame = +3
Query: 378 GEEGSKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNAHS-SLLSNAQYSTQ 554
G G ++R+ + S G S + S RG + Y + +S S S + YS
Sbjct: 112 GGYGRRSRSPRRRHRSRSRGPSCSRSRSRSRYRGSRYGRSPYSRSPYSRSRYSRSPYSRS 171
Query: 555 AINRN----SHYSNSQFSNSNYRNSHRASPSQSQHISDLQASDGS 677
+ SHYS+S +SNS Y H +S S S+ S + S
Sbjct: 172 RYRESRYGGSHYSSSGYSNSRYSRYH-SSRSHSKSGSSTSSRSAS 215
>AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.
Length = 4061
Score = 32.7 bits (71), Expect = 1.7
Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 7/178 (3%)
Frame = +3
Query: 273 AQRGNMGGNYERAHNMDSLAQRHLSGAISQVEGELGEEGSKTRTGSVYTAANSAGFYGSG 452
++RG G +YE++ + + H S SQ + S +R+ S T + GS
Sbjct: 3441 SRRGRQGSHYEQSVDRSGHSGSHHSHTTSQGRSDASRGQSGSRSASRQTRNDEQSGDGS- 3499
Query: 453 NYDLSNLRGRNFQEGTYLDNAHSSLLSNAQYSTQAINRNSHYSNSQFSNS--NYRNSHRA 626
+ S+ + + T D++ S Q + +RN S SQ S+S + +S R
Sbjct: 3500 RHSWSH----HHEASTQADSSRHSQSGQGQSAGPRTSRNQGSSVSQDSDSQGHSEDSERW 3555
Query: 627 SPSQSQH---ISDLQASDGSQ--GYQQFDYGGQAAAAEIYSKSNGRVASDRYSNDQNA 785
S S S++ + Q+ DGS+ D G +AE S+ +G ++ S Q A
Sbjct: 3556 SGSASRNHRGSAQEQSRDGSRHPTSHHEDRAGHGHSAE-SSRQSGTHHAENSSGGQAA 3612
>AF031166-1|AAK54351.1| 272|Homo sapiens SRp46 splicing factor
protein.
Length = 272
Score = 32.7 bits (71), Expect = 1.7
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Frame = +3
Query: 387 GSKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNAHS-SLLSNAQYSTQAIN 563
G ++R+ + S G S + S RG + Y + +S S S + YS
Sbjct: 112 GRRSRSPRRRHRSRSRGPSCSRSRSRSRYRGSRYSRSPYSRSPYSRSRYSRSPYSRSRYR 171
Query: 564 RN----SHYSNSQFSNSNYRNSHRASPSQSQHISDLQASDGS 677
+ SHYS+S +SNS Y H +S S S+ S + S
Sbjct: 172 ESRYGGSHYSSSGYSNSRYSRYH-SSRSHSKSGSSTSSRSAS 212
>AF031165-1|AAK54350.1| 282|Homo sapiens SRp46 splicing factor
protein.
Length = 282
Score = 32.7 bits (71), Expect = 1.7
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 5/102 (4%)
Frame = +3
Query: 387 GSKTRTGSVYTAANSAGFYGSGNYDLSNLRGRNFQEGTYLDNAHS-SLLSNAQYSTQAIN 563
G ++R+ + S G S + S RG + Y + +S S S + YS
Sbjct: 122 GRRSRSPRRRHRSRSRGPSCSRSRSRSRYRGSRYSRSPYSRSPYSRSRYSRSPYSRSRYR 181
Query: 564 RN----SHYSNSQFSNSNYRNSHRASPSQSQHISDLQASDGS 677
+ SHYS+S +SNS Y H +S S S+ S + S
Sbjct: 182 ESRYGGSHYSSSGYSNSRYSRYH-SSRSHSKSGSSTSSRSAS 222
>X77366-1|CAA54555.1| 772|Homo sapiens hbZ17 protein.
Length = 772
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +3
Query: 495 GTYLDNAHS-SLLSNAQYSTQAINRNSHYSNSQFSN--SNYRNSHRASPSQSQHISDLQA 665
G LD++HS S LS+++ S+ + + +S S+S S+ S++ S DL+
Sbjct: 478 GLSLDSSHSPSSLSSSEGSSSSSSSSSSSSSSASSSASSSFSEEGAVGYSSDSETLDLEE 537
Query: 666 SDGSQGYQ 689
++G+ GYQ
Sbjct: 538 AEGAVGYQ 545
>U08853-1|AAA20466.1| 447|Homo sapiens transcription factor LCR-F1
protein.
Length = 447
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +3
Query: 495 GTYLDNAHS-SLLSNAQYSTQAINRNSHYSNSQFSN--SNYRNSHRASPSQSQHISDLQA 665
G LD++HS S LS+++ S+ + + +S S+S S+ S++ S DL+
Sbjct: 153 GLSLDSSHSPSSLSSSEGSSSSSSSSSSSSSSASSSASSSFSEEGAVGYSSDSETLDLEE 212
Query: 666 SDGSQGYQ 689
++G+ GYQ
Sbjct: 213 AEGAVGYQ 220
>BC010623-1|AAH10623.1| 742|Homo sapiens NFE2L1 protein protein.
Length = 742
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +3
Query: 495 GTYLDNAHS-SLLSNAQYSTQAINRNSHYSNSQFSN--SNYRNSHRASPSQSQHISDLQA 665
G LD++HS S LS+++ S+ + + +S S+S S+ S++ S DL+
Sbjct: 448 GLSLDSSHSPSSLSSSEGSSSSSSSSSSSSSSASSSASSSFSEEGAVGYSSDSETLDLEE 507
Query: 666 SDGSQGYQ 689
++G+ GYQ
Sbjct: 508 AEGAVGYQ 515
>AK090459-1|BAC03440.1| 791|Homo sapiens FLJ00380 protein protein.
Length = 791
Score = 32.3 bits (70), Expect = 2.3
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Frame = +3
Query: 495 GTYLDNAHS-SLLSNAQYSTQAINRNSHYSNSQFSN--SNYRNSHRASPSQSQHISDLQA 665
G LD++HS S LS+++ S+ + + +S S+S S+ S++ S DL+
Sbjct: 497 GLSLDSSHSPSSLSSSEGSSSSSSSSSSSSSSASSSASSSFSEEGAVGYSSDSETLDLEE 556
Query: 666 SDGSQGYQ 689
++G+ GYQ
Sbjct: 557 AEGAVGYQ 564
>M95586-1|AAA58445.1| 574|Homo sapiens E2A/HLF fusion protein
protein.
Length = 574
Score = 31.9 bits (69), Expect = 3.0
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 429 SAGFYGSGNYDLSNLR-GRNFQEGTYLDNAHSSLLSN 536
S+G +GSG+ S+ R F EGT+ +HSSL S+
Sbjct: 55 SSGSWGSGDQSSSSFDPSRTFSEGTHFTESHSSLSSS 91
>M31523-1|AAA61146.1| 654|Homo sapiens TCF3 protein.
Length = 654
Score = 31.9 bits (69), Expect = 3.0
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 429 SAGFYGSGNYDLSNLR-GRNFQEGTYLDNAHSSLLSN 536
S+G +GSG+ S+ R F EGT+ +HSSL S+
Sbjct: 55 SSGSWGSGDQSSSSFDPSRTFSEGTHFTESHSSLSSS 91
>M31222-1|AAA52331.1| 648|Homo sapiens TCF3 protein.
Length = 648
Score = 31.9 bits (69), Expect = 3.0
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 429 SAGFYGSGNYDLSNLR-GRNFQEGTYLDNAHSSLLSN 536
S+G +GSG+ S+ R F EGT+ +HSSL S+
Sbjct: 49 SSGSWGSGDQSSSSFDPSRTFSEGTHFTESHSSLSSS 85
>BC110579-1|AAI10580.1| 651|Homo sapiens TCF3 protein protein.
Length = 651
Score = 31.9 bits (69), Expect = 3.0
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 429 SAGFYGSGNYDLSNLR-GRNFQEGTYLDNAHSSLLSN 536
S+G +GSG+ S+ R F EGT+ +HSSL S+
Sbjct: 55 SSGSWGSGDQSSSSFDPSRTFSEGTHFTESHSSLSSS 91
>BC075798-1|AAH75798.1| 1222|Homo sapiens GPR126 protein protein.
Length = 1222
Score = 31.9 bits (69), Expect = 3.0
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +3
Query: 546 STQAINRNSHY--SNSQFSNSNY--RNSHRASPSQSQHISDLQASDGSQ 680
S+ +I NS Y S S+ S++ Y RNSH S S + +S L +DG Q
Sbjct: 1134 SSSSIGSNSTYLTSKSKSSSTTYFKRNSHTDSASMDKSLSKLAHADGDQ 1182
>AY181244-1|AAO27356.1| 541|Homo sapiens G protein-coupled receptor
126 protein.
Length = 541
Score = 31.9 bits (69), Expect = 3.0
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +3
Query: 546 STQAINRNSHY--SNSQFSNSNY--RNSHRASPSQSQHISDLQASDGSQ 680
S+ +I NS Y S S+ S++ Y RNSH S S + +S L +DG Q
Sbjct: 453 SSSSIGSNSTYLTSKSKSSSTTYFKRNSHTDSASMDKSLSKLAHADGDQ 501
>AF216967-1|AAO13250.1| 1222|Homo sapiens putative vascular inducible
G protein-coupled receptor protein.
Length = 1222
Score = 31.9 bits (69), Expect = 3.0
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +3
Query: 546 STQAINRNSHY--SNSQFSNSNY--RNSHRASPSQSQHISDLQASDGSQ 680
S+ +I NS Y S S+ S++ Y RNSH S S + +S L +DG Q
Sbjct: 1134 SSSSIGSNSTYLTSKSKSSSTTYFKRNSHTDSASMDKSLSKLAHADGDQ 1182
>AC005321-2|AAC27373.1| 606|Homo sapiens TFE2_HUMAN protein.
Length = 606
Score = 31.9 bits (69), Expect = 3.0
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 429 SAGFYGSGNYDLSNLR-GRNFQEGTYLDNAHSSLLSN 536
S+G +GSG+ S+ R F EGT+ +HSSL S+
Sbjct: 7 SSGSWGSGDQSSSSFDPSRTFSEGTHFTESHSSLSSS 43
>AB183549-1|BAD27574.1| 1222|Homo sapiens developmentally regulated
G-protein-coupled receptor beta 2 protein.
Length = 1222
Score = 31.9 bits (69), Expect = 3.0
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +3
Query: 546 STQAINRNSHY--SNSQFSNSNY--RNSHRASPSQSQHISDLQASDGSQ 680
S+ +I NS Y S S+ S++ Y RNSH S S + +S L +DG Q
Sbjct: 1134 SSSSIGSNSTYLTSKSKSSSTTYFKRNSHTDSASMDKSLSKLAHADGDQ 1182
>AB183548-1|BAD27573.1| 1250|Homo sapiens developmentally regulated
G-protein-coupled receptor beta 1 protein.
Length = 1250
Score = 31.9 bits (69), Expect = 3.0
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Frame = +3
Query: 546 STQAINRNSHY--SNSQFSNSNY--RNSHRASPSQSQHISDLQASDGSQ 680
S+ +I NS Y S S+ S++ Y RNSH S S + +S L +DG Q
Sbjct: 1162 SSSSIGSNSTYLTSKSKSSSTTYFKRNSHTDSASMDKSLSKLAHADGDQ 1210
>AK056681-1|BAB71252.1| 600|Homo sapiens protein ( Homo sapiens
cDNA FLJ32119 fis, clone PEBLM1000034, highly similar to
RNA-BINDING PROTEIN EWS. ).
Length = 600
Score = 31.1 bits (67), Expect = 5.3
Identities = 31/122 (25%), Positives = 50/122 (40%), Gaps = 1/122 (0%)
Frame = +3
Query: 441 YGSGNYDLSNLRGRNFQEGTYLDNAHSSLLSNAQYSTQ-AINRNSHYSNSQFSNSNYRNS 617
YG+G YD + Q +A+ + + Y Q A + YS++Q S ++S
Sbjct: 93 YGTGAYDTTTATVTTTQASYAAQSAYGTQPAYPAYGQQPAATAPTSYSSTQ-PTSYDQSS 151
Query: 618 HRASPSQSQHISDLQASDGSQGYQQFDYGGQAAAAEIYSKSNGRVASDRYSNDQNAYDQY 797
+ + Q S GS G QQ YG Q + + A +YS ++Y Q
Sbjct: 152 YSQQNTYGQPSS--YGQQGSYG-QQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQ 208
Query: 798 NS 803
+S
Sbjct: 209 SS 210
>BC020264-1|AAH20264.1| 406|Homo sapiens HERPUD family member 2
protein.
Length = 406
Score = 30.3 bits (65), Expect = 9.2
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 561 NRNSHYSNSQFSNSNYRNSHRASPSQSQHISDLQASDGSQGYQQ 692
NR SH + + SNS+ +S +PS Q L S+G +Q
Sbjct: 100 NRESHEALTSSSNSSSDHSGSTTPSSGQETLSLAVGSSSEGLRQ 143
>BC005091-1|AAH05091.1| 406|Homo sapiens HERPUD2 protein protein.
Length = 406
Score = 30.3 bits (65), Expect = 9.2
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +3
Query: 561 NRNSHYSNSQFSNSNYRNSHRASPSQSQHISDLQASDGSQGYQQ 692
NR SH + + SNS+ +S +PS Q L S+G +Q
Sbjct: 100 NRESHEALTSSSNSSSDHSGSTTPSSGQETLSLAVGSSSEGLRQ 143
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,539,267
Number of Sequences: 237096
Number of extensions: 2158495
Number of successful extensions: 4857
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 4556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4837
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -