Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_N15
(893 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 176 3e-45
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 161 2e-40
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 146 4e-36
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 50 8e-15
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 62 1e-10
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 45 2e-05
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 38 0.003
SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos... 37 0.003
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 35 0.014
SPBC9B6.09c |mdl1||mitochondrial peptide-transporting ATPase|Sch... 34 0.031
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 33 0.041
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 32 0.096
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 32 0.13
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 31 0.22
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 30 0.39
SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter Atm1|S... 28 2.1
SPAC222.06 |mak16||nuclear HMG-like acidic protein Mak16|Schizos... 27 2.7
SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr... 27 3.6
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 27 3.6
SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces ... 26 8.3
SPAP8A3.11c |||mitochondrial GTPase Mtg2|Schizosaccharomyces pom... 26 8.3
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 26 8.3
SPAC9E9.14 |vps24||vacuolar sorting protein Vps24|Schizosaccharo... 26 8.3
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 176 bits (429), Expect = 3e-45
Identities = 89/176 (50%), Positives = 122/176 (69%), Gaps = 1/176 (0%)
Frame = +3
Query: 357 SRDIKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVPIPEHI 536
SRDIKI +++++F+G L+++ +ELN G+RYGL+G NG GKS+ L ++ R+V PEHI
Sbjct: 73 SRDIKIDSYTLSFHGRLLIENATIELNHGQRYGLLGDNGSGKSTFLESVAARDVEYPEHI 132
Query: 537 DIFHLTREMPASDKTALQCVMEVDEERV-KLEKLAEMLAHCEDDESQEQLMDVYDRLDDL 713
D + L E SD A+ +++ +++V KLE E L+ DD L Y+ LDD+
Sbjct: 133 DSYLLNAEAEPSDVNAVDYIIQSAKDKVQKLEAEIEELSTA-DDVDDVLLESKYEELDDM 191
Query: 714 SADTAEARAANILHGLGFTKEMQQKATKDFSGGWRMRIALARALYVKPHLLLLDEP 881
T EA+AA ILHGLGFT+EM K TKD SGGWRMR+AL+RAL++KP LLLLDEP
Sbjct: 192 DPSTFEAKAAMILHGLGFTQEMMAKPTKDMSGGWRMRVALSRALFIKPSLLLLDEP 247
Score = 33.1 bits (72), Expect = 0.055
Identities = 37/158 (23%), Positives = 62/158 (39%)
Frame = +3
Query: 408 LLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVPIPEHIDIFHLTREMPASDKTAL 587
L +D ++ R +VG NG GKS+LL + +PI ++ + + S +A
Sbjct: 405 LYRDLSFGIDMDSRVAIVGKNGTGKSTLLNLITGLLIPIEGNVSRYSGLKMAKYSQHSA- 463
Query: 588 QCVMEVDEERVKLEKLAEMLAHCEDDESQEQLMDVYDRLDDLSADTAEARAANILHGLGF 767
+ L + D E +MD Y + + ++L G
Sbjct: 464 -----------------DQLPY--DKSPLEYIMDTYK---PKFPERELQQWRSVLGKFGL 501
Query: 768 TKEMQQKATKDFSGGWRMRIALARALYVKPHLLLLDEP 881
+ Q + S G + R+ A +PH+LLLDEP
Sbjct: 502 SGLHQTSEIRTLSDGLKSRVVFAALALEQPHILLLDEP 539
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 161 bits (390), Expect = 2e-40
Identities = 94/202 (46%), Positives = 122/202 (60%), Gaps = 27/202 (13%)
Frame = +3
Query: 357 SRDIKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVPIPEHI 536
S+DIKI + F G +L L L GRRYGL G NG GKS+LL AL RRE+ IP HI
Sbjct: 180 SKDIKIDGIDLAFAGHRILTGASLTLAQGRRYGLTGRNGIGKSTLLRALSRREIAIPTHI 239
Query: 537 DIFHLTREMPASDKTALQCVMEVD---------EERVK-----LEKLAEMLA-------- 650
I H+ +EM D ALQ V++ D +E++ +EK E L+
Sbjct: 240 TILHVEQEMTGDDTPALQSVLDADVWRKYLIQDQEKITNRLSTIEKELEELSKDQTADQA 299
Query: 651 -----HCEDDESQEQLMDVYDRLDDLSADTAEARAANILHGLGFTKEMQQKATKDFSGGW 815
E DE +L+D+ ++L ++ +D AE+RAA IL GLGFT+EMQ ATK FSGGW
Sbjct: 300 ISRRLERERDELDLRLLDIQNKLSEMDSDRAESRAATILAGLGFTQEMQSHATKTFSGGW 359
Query: 816 RMRIALARALYVKPHLLLLDEP 881
RMR++LARAL+ +P LLLLDEP
Sbjct: 360 RMRLSLARALFCQPDLLLLDEP 381
Score = 30.3 bits (65), Expect = 0.39
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 804 SGGWRMRIALARALYVKPHLLLLDEP 881
SGG + R+A A PH+L+LDEP
Sbjct: 638 SGGQKSRVAFACLGLQNPHILILDEP 663
Score = 29.1 bits (62), Expect = 0.89
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 399 GSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAAL 503
G +L+ +++ R G+VG NG GKS++L L
Sbjct: 530 GHPILKHVDIDVQMDSRIGVVGPNGAGKSTMLKLL 564
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 146 bits (354), Expect = 4e-36
Identities = 77/184 (41%), Positives = 115/184 (62%), Gaps = 1/184 (0%)
Frame = +3
Query: 333 GHWLCTLXSRDIKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRR 512
G+ L SRD+++ S++ +G L++D+ L L GRRYGL+ NG GKS+LL A+
Sbjct: 265 GNLLSPPNSRDLQVEKLSVSAWGKLLIKDSELNLINGRRYGLIAPNGSGKSTLLHAIACG 324
Query: 513 EVPIPEHIDIFHLTREMPASDKTALQCVMEVDE-ERVKLEKLAEMLAHCEDDESQEQLMD 689
+P P +D + L RE ++ T ++ V++++E ER LE + E L + D++ +L
Sbjct: 325 LIPTPSSLDFYLLDREYIPNELTCVEAVLDINEQERKHLEAMMEDLLD-DPDKNAVELDT 383
Query: 690 VYDRLDDLSADTAEARAANILHGLGFTKEMQQKATKDFSGGWRMRIALARALYVKPHLLL 869
+ RL DL + ++ R IL GL FT EM K T + SGGWRMRIALAR L++KP L++
Sbjct: 384 IQTRLTDLETENSDHRVYKILRGLQFTDEMIAKRTNELSGGWRMRIALARILFIKPTLMM 443
Query: 870 LDEP 881
LDEP
Sbjct: 444 LDEP 447
Score = 31.9 bits (69), Expect = 0.13
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 729 EARAANILHGLGFTKEMQQKATKDFSGGWRMRIALARALYVKPHLLLLDEP 881
E I+ G T + Q S G R R+ A +PH+LLLDEP
Sbjct: 689 EGEMRRIVGRYGLTGKSQVIPMGQLSDGQRRRVLFAFLGMTQPHILLLDEP 739
Score = 25.8 bits (54), Expect = 8.3
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = +3
Query: 351 LXSRDIKIANFSITFYGSELLQDTL-LELNCGRRYGLVGLNGCGKSSLLAALGRREVP 521
+ S IK + S + G + L L+ R LVG NG GK++L+ + + P
Sbjct: 589 IPSPAIKFQDVSFNYPGGPTIFSKLNFGLDLKSRVALVGPNGAGKTTLIKLILEKVQP 646
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 49.6 bits (113), Expect(2) = 8e-15
Identities = 29/111 (26%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Frame = +3
Query: 363 DIKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVP-IPEHID 539
D+ FS+ + LL T L L GRRYGL G NG GKS+L+ A+ +V P H+
Sbjct: 434 DLCNCEFSLAYGAKILLNRTRLRLKRGRRYGLCGPNGSGKSTLMRAIVNGQVEGFPTHLR 493
Query: 540 IFHLTREMPASDKTALQCVMEVDEERVKLEKLAEMLAHCEDDESQEQLMDV 692
++ ++ S+ + + V ++ E++ +++ ++L+++
Sbjct: 494 TVYVEHDIDESEADTPSVDFILQDPAVPIKDRDEIVKALKENSFTDELINM 544
Score = 46.4 bits (105), Expect(2) = 8e-15
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +3
Query: 765 FTKEMQQKATKDFSGGWRMRIALARALYVKPHLLLLDEP 881
FT E+ SGGW+M++AL RA++ P +LLLDEP
Sbjct: 537 FTDELINMPIGSLSGGWKMKLALTRAMFKNPDILLLDEP 575
Score = 35.9 bits (79), Expect = 0.008
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 759 LGFTKEM-QQKATKDFSGGWRMRIALARALYVKPHLLLLDEP 881
LG E+ K SGG ++++ LA +++PH+++LDEP
Sbjct: 889 LGLDAELVSHSRIKGLSGGQKVKLVLAACTWLRPHVIVLDEP 930
Score = 30.3 bits (65), Expect = 0.39
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 366 IKIANFSITFYGSEL--LQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVP 521
IK+ + S + G+ L D +++ R ++G NG GKS+L+ L +P
Sbjct: 673 IKVQHMSFQYPGTSKPQLNDISFQVSLSSRIAVIGPNGAGKSTLIKVLTGELLP 726
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 62.1 bits (144), Expect = 1e-10
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +3
Query: 711 LSADTAEARAANILHGLGFTKEMQQKATKDFSGGWRMRIALARALYVKPHLLLLDEP 881
L+ + AA+ LH +GFT EMQ+ SGGW+M++ LARA+ K +LLLDEP
Sbjct: 533 LTMNVTRQEAADALHSVGFTAEMQENPVASLSGGWKMKLELARAMLQKADILLLDEP 589
Score = 54.8 bits (126), Expect = 2e-08
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = +3
Query: 348 TLXSRDIKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREV--- 518
T+ ++ +FS+ + G LL T L L G RYG+VG NGCGKS+LL A+G +V
Sbjct: 439 TIEEEELVNTDFSLAYGGRLLLSHTNLHLYRGHRYGVVGHNGCGKSTLLRAIGDYKVENF 498
Query: 519 PIPEHIDIFHLTREMPASD 575
P P+ + + + D
Sbjct: 499 PSPDEVKTCFVAHSLQGED 517
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 804 SGGWRMRIALARALYVKPHLLLLDEP 881
SGG ++++ +A L+ P LL+LDEP
Sbjct: 912 SGGQKVKVVIAACLWNNPQLLVLDEP 937
Score = 29.1 bits (62), Expect = 0.89
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +3
Query: 366 IKIANFSITFYGSEL--LQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVP 521
+K+ N S T+ ++ L + + L+ R ++G NG GKS+L+ L +P
Sbjct: 692 LKMTNASYTYPNAKKKSLDNVTVGLSLSSRVAILGPNGAGKSTLIKVLIGEVIP 745
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 44.8 bits (101), Expect = 2e-05
Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 2/158 (1%)
Frame = +3
Query: 411 LQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVPIPE-HIDIFHLTREMPASDKTAL 587
L + L + + +VG++G GKS+L+ L R+ P + +ID + LT L
Sbjct: 1118 LNNVSLSIEAREKVAIVGISGSGKSTLVELL-RKTYPSEDIYIDGYPLTN---IDTNWLL 1173
Query: 588 QCVMEVDEERVKL-EKLAEMLAHCEDDESQEQLMDVYDRLDDLSADTAEARAANILHGLG 764
+ V VD++ L + E L + D D+ +D L N+ +GL
Sbjct: 1174 KKVAIVDQKPHLLGSTILESLLYGVD-------RDINSVMDALDKTYMTEVIQNLPNGLD 1226
Query: 765 FTKEMQQKATKDFSGGWRMRIALARALYVKPHLLLLDE 878
T ++ +K+FSGG R+A ARAL P LL+LDE
Sbjct: 1227 -TPLLE--FSKNFSGGQIQRLAFARALLRNPRLLILDE 1261
Score = 33.5 bits (73), Expect = 0.041
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +3
Query: 804 SGGWRMRIALARALYVKPHLLLLDEP 881
SGG + RIALARAL +L+LDEP
Sbjct: 572 SGGQQQRIALARALLRDTEILILDEP 597
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 37.5 bits (83), Expect = 0.003
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 4/176 (2%)
Frame = +3
Query: 366 IKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLA-ALGRREVPIPEHIDI 542
I + + + ++G ++L D + G R+ L G NG GK++LLA +G +I
Sbjct: 265 ISMEHLNCVYWGRKVLSDINWTIREGERWALTGSNGSGKTTLLAYVVGDHPKLFASNIKF 324
Query: 543 FHLTREMPASDKTALQCVMEVDEERVKLEKLAEMLAHCEDDES-QEQLMDVYDRLDDLS- 716
F + T + + ++ E E+ H + E L+ + +
Sbjct: 325 FGKS----IGPGTGIS-IFDIQENIGHCS--PEIHNHFPKQHTCFEALLSAWSTTFTIPK 377
Query: 717 -ADTAEARAANILHGLGFTKEMQQKATKDFSGGWRMRIALARALYVKPHLLLLDEP 881
+T A ++IL K+++ K S G + I RA+ +P L++LDEP
Sbjct: 378 LTETRLAAISSILEEFEL-KDIKDKPLSSISVGMQRFILFCRAIVKQPRLVVLDEP 432
Score = 31.5 bits (68), Expect = 0.17
Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 4/176 (2%)
Frame = +3
Query: 366 IKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVPIPEHIDIF 545
+K AN + L ++ EL + + ++G G G+++ L + P P +
Sbjct: 5 VKFANTTFLDARFPLFKNVSFELARKQNWAIIGNTGSGRTTFLRCIQGSFTPSPSTSFSY 64
Query: 546 HLTREMPASDKTALQCVMEVDEERVKLEKLAEMLAHCEDDES----QEQLMDVYDRLDDL 713
+ S A+Q + + + +E D E ++ L+ Y R ++
Sbjct: 65 PFLKGKSDSPWQAIQLLDFKSSGQQRAAYYSERYHSFRDKEHDTTLEKWLLGAY-RGNEK 123
Query: 714 SADTAEARAANILHGLGFTKEMQQKATKDFSGGWRMRIALARALYVKPHLLLLDEP 881
A AA++ + + + S G R LA L +P LLLLDEP
Sbjct: 124 FASQHVQEAASMTQ----LSHLLPSSLINLSNGQSRRAMLASKLVQRPQLLLLDEP 175
>SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit
Caf16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 37.1 bits (82), Expect = 0.003
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +3
Query: 363 DIKIANFSITFYGSE--LLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVPIPEHI 536
++ ++N S TF + L L+L G R LVG NG GKS+LL L + + HI
Sbjct: 2 EVTVSNLSYTFSPKQPLSLDHVTLDLPKGSRTLLVGANGAGKSTLLKLLSGKSLAKAGHI 61
Query: 537 DI 542
+
Sbjct: 62 SV 63
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 35.1 bits (77), Expect = 0.014
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +3
Query: 762 GFTKEMQQKATKDFSGGWRMRIALARALYVKPHLLLLDE 878
G+ QK + SGG + RIA+ARAL P +LLLDE
Sbjct: 1247 GYNTLCGQKGSS-LSGGQKQRIAIARALIRNPKILLLDE 1284
Score = 33.9 bits (74), Expect = 0.031
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 5/151 (3%)
Frame = +3
Query: 441 GRRYGLVGLNGCGKSSLLAALGRREVPIPEHI--DIFHLTREMPASDKTALQCVMEVDEE 614
G+ LVG +G GKS+++ + R PI + D L AS + + V + E
Sbjct: 448 GKITALVGASGSGKSTIIGLVERFYDPIGGQVFLDGKDLRTLNVASLRNQISLVQQ--EP 505
Query: 615 RVKLEKLAEMLAHCEDDESQEQLMDVYDRLDDLSADTAE-ARAANILHGLG--FTKEMQQ 785
+ + E + + D + L + L+ D A+ A A + + L F+ + Q
Sbjct: 506 VLFATTVFENITYGLPDTIKGTLSK--EELERRVYDAAKLANAYDFIMTLPEQFSTNVGQ 563
Query: 786 KATKDFSGGWRMRIALARALYVKPHLLLLDE 878
+ SGG + RIA+ARA+ P +LLLDE
Sbjct: 564 RGFL-MSGGQKQRIAIARAVISDPKILLLDE 593
>SPBC9B6.09c |mdl1||mitochondrial peptide-transporting
ATPase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 726
Score = 33.9 bits (74), Expect = 0.031
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +3
Query: 732 ARAANILHGLGFTKEMQ-QKATK--DFSGGWRMRIALARALYVKPHLLLLDE 878
A+ AN L F ++ Q T+ SGG + RIA+ARAL P L+LDE
Sbjct: 594 AKRANCSFVLSFPEKWSTQVGTRGLQLSGGQKQRIAIARALLRNPAFLILDE 645
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 33.5 bits (73), Expect = 0.041
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +3
Query: 762 GFTKEMQQKATKDFSGGWRMRIALARALYVKPHLLLLDE 878
G+ + ++ K SGG + R+A+ARA+ P ++LLDE
Sbjct: 709 GYNSRVGERGLK-LSGGEKQRVAVARAILKDPSIILLDE 746
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 32.3 bits (70), Expect = 0.096
Identities = 41/180 (22%), Positives = 78/180 (43%), Gaps = 3/180 (1%)
Frame = +3
Query: 348 TLXSRDIKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVPIP 527
TL IK S + + +L+D LE+ + +VG G GKS++ L R + +
Sbjct: 1176 TLGHVSIKNLTVSYSIGQAAVLEDINLEILPKEKIAIVGRTGSGKSTMGLTLLRFTMIMS 1235
Query: 528 EHIDIFHLTREMPASDKTAL-QCVMEVDEERVKLEKLAEMLAHCEDDESQEQLMDVYDRL 704
+++ + ++ + D L Q + + ++ V + ++ +L ++ L
Sbjct: 1236 GAVEVDGI--DINSLDLEVLRQRISLIPQDPVLISGTVRSNLDPFEEYGDGELNEI---L 1290
Query: 705 DDLSADT-AEARAANILHGLGFTKEMQ-QKATKDFSGGWRMRIALARALYVKPHLLLLDE 878
S ++ +A N L + +FS G R +ALARAL K +++LDE
Sbjct: 1291 KTASCESLVQASNKNSLDAFAIHLDTPVDSGGVNFSSGQRQILALARALVRKSRIVILDE 1350
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +3
Query: 804 SGGWRMRIALARALYVKPHLLLLDE 878
SGG + R++LARALY + + D+
Sbjct: 708 SGGQKQRVSLARALYSNAEVYIFDD 732
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1465
Score = 31.9 bits (69), Expect = 0.13
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +3
Query: 762 GFTKEMQQKATKDFSGGWRMRIALARALYVKPHLLLLDE 878
G E+ QK SGG + RI+LARA+Y + + LLD+
Sbjct: 692 GDQTEVGQKGAS-LSGGQKSRISLARAIYSQADIYLLDD 729
Score = 30.7 bits (66), Expect = 0.29
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 2/158 (1%)
Frame = +3
Query: 411 LQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVPIPEHIDIFH--LTREMPASDKTA 584
L + +E++ + G+VG G GKS+L AL R P I+I + +T+ ++
Sbjct: 1243 LNNINIEISPREKIGIVGRTGAGKSTLAMALFRIIEPTEGKIEIDNEDITKFGLYDLRSR 1302
Query: 585 LQCVMEVDEERVKLEKLAEMLAHCEDDESQEQLMDVYDRLDDLSADTAEARAANILHGLG 764
L + + E ++ + E L D + +++ L+ S ++ + GL
Sbjct: 1303 LSIIPQ--ESQIFEGNIRENL----DPNHRLTDKKIWEVLEIASLKNCISQLED---GL- 1352
Query: 765 FTKEMQQKATKDFSGGWRMRIALARALYVKPHLLLLDE 878
+++ + A +FS G R I LAR L +LLLDE
Sbjct: 1353 YSRVAEGGA--NFSSGQRQLICLARVLLTSTRILLLDE 1388
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 31.1 bits (67), Expect = 0.22
Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 3/175 (1%)
Frame = +3
Query: 363 DIKIANFSITFY--GSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVPIPEHI 536
DI + S+++ G +L+D L +N + +VG G GKS+L L R I
Sbjct: 1211 DIVFNHVSVSYSAAGPTILKDVNLHINPSEKVAVVGRTGSGKSTLGLTLLRFTHRISG-- 1268
Query: 537 DIFHLTREMPASDKTAL-QCVMEVDEERVKLEKLAEMLAHCEDDESQEQLMDVYDRLDDL 713
+I+ RE + + AL Q + + ++ + D+ L +
Sbjct: 1269 EIYINGRETQSVNLNALRQRISFIPQDPILFSGTVRSNLDPFDELEDNFLNEALKTSGAS 1328
Query: 714 SADTAEARAANILHGLGFTKEMQQKATKDFSGGWRMRIALARALYVKPHLLLLDE 878
S A +H + + + + +FS G + +ALARA+ + +++LDE
Sbjct: 1329 SMIMAHTDDQKPIH-ITLDTHVASEGS-NFSQGQKQVLALARAIVRRSKIIILDE 1381
Score = 30.7 bits (66), Expect = 0.29
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 804 SGGWRMRIALARALYVKPHLLLLDE 878
SGG + RIALARA+Y ++L+D+
Sbjct: 741 SGGQKQRIALARAVYSPTSIVLMDD 765
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 30.3 bits (65), Expect = 0.39
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 804 SGGWRMRIALARALYVKPHLLLLDE 878
SGG + RI+LARA+Y + + LLD+
Sbjct: 707 SGGQKARISLARAVYSRSDIYLLDD 731
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +3
Query: 366 IKIANFSITFYGSE--LLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGRREVPIPEHID 539
IK ++S+ + + +L D + + + G+VG G GKS+L AL R P I
Sbjct: 1224 IKFDHYSVRYRENLPLVLNDISVNIKPQEKIGIVGRTGAGKSTLTLALFRLIEPTSGDIQ 1283
Query: 540 I 542
+
Sbjct: 1284 L 1284
Score = 26.6 bits (56), Expect = 4.8
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 5/56 (8%)
Frame = +3
Query: 363 DIKIANFSITFYGSELLQDTLLELNCGRRYG----LVGLNGCGKSSLL-AALGRRE 515
+IK FS + G + TL +++ R G +VG G GKSSLL A LG +
Sbjct: 579 EIKKGTFSWSGPGQNAAEPTLRDIDFVARRGELCCIVGKVGMGKSSLLEACLGNMQ 634
>SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter
Atm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 693
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 408 LLQDTLLELNCGRRYGLVGLNGCGKSSLLAALGR 509
+L + G + VG +GCGKS++L L R
Sbjct: 458 ILNGCSFNIPAGAKVAFVGASGCGKSTILRLLFR 491
>SPAC222.06 |mak16||nuclear HMG-like acidic protein
Mak16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +3
Query: 603 VDEERVKLEKLAEMLAHCEDDESQEQLMDVYDRL-DDLSADTAEA 734
+DE + E+ L DDE +E++ D+ D L D S +T+E+
Sbjct: 197 IDEGEEEEEREEAELEFVSDDEDEEEISDLEDWLGSDQSMETSES 241
>SPBC14F5.06 |||iron-sulfur protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 593
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3
Query: 441 GRRYGLVGLNGCGKSSLLAALGRREVP 521
G+ GLVG NG GKS+ L L + P
Sbjct: 103 GQVLGLVGTNGIGKSTALKILSGKMKP 129
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 27.1 bits (57), Expect = 3.6
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Frame = +3
Query: 552 TREMPASDKTALQCVMEVDEERVKLEK-LAEMLAHCEDDESQEQLMDVYDRLDDLSADTA 728
TRE ASD L+ +M EE V + L +H + + +E++ + + L+A+ A
Sbjct: 1000 TRERNASDNLRLRALMRQLEEAVTQKNYLLSQQSHDDRESFRERMQILKSKYGALNAERA 1059
Query: 729 EARAANILHGLGFTKEMQQKATKD 800
LG K+++ TKD
Sbjct: 1060 GL--------LGECKQLENSITKD 1075
>SPCC737.03c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 615
Score = 25.8 bits (54), Expect = 8.3
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -1
Query: 479 STPIKSD*PISSPTIQLQESILK*LTPIESN*KVS 375
S+P++ P+ PT+QLQ S L L P E KV+
Sbjct: 437 SSPVR---PMLKPTLQLQNSPLSKLVPQEVGNKVN 468
>SPAP8A3.11c |||mitochondrial GTPase Mtg2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 419
Score = 25.8 bits (54), Expect = 8.3
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 426 LELNCGRRYGLVGLNGCGKSSLLAALGRREVPIPEH 533
LEL GLVGL GKS+LL L + + E+
Sbjct: 231 LELKTICEIGLVGLPNAGKSTLLNCLTASKSKVGEY 266
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/57 (21%), Positives = 26/57 (45%)
Frame = +3
Query: 507 RREVPIPEHIDIFHLTREMPASDKTALQCVMEVDEERVKLEKLAEMLAHCEDDESQE 677
+ ++P +F+L +PAS T ++ + +K+ E +A +D +E
Sbjct: 298 QHKIPAINEDGLFYLITHLPASGGTGAAAQAAQQKKEQEEKKILETVARMDDSNKKE 354
>SPAC9E9.14 |vps24||vacuolar sorting protein
Vps24|Schizosaccharomyces pombe|chr 1|||Manual
Length = 231
Score = 25.8 bits (54), Expect = 8.3
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 561 MPA-SDKTALQCVMEVDEERVKLEKLAEMLAHCEDDESQEQLMDVYDRLDDLSA 719
+PA S+K A + L L+ +A + +EQL+D+ D+LD L +
Sbjct: 178 IPAPSEKAADAATHREQSLKQALPSLSNGIAKDSTEIDEEQLLDIRDKLDALKS 231
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,265,216
Number of Sequences: 5004
Number of extensions: 62465
Number of successful extensions: 343
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 340
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 450492750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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