Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_N13
         (866 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    27   0.30 
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    25   0.68 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.8  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 26.6 bits (56), Expect = 0.30
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +2

Query: 323 GYERPDRPDK*RMCDSSNNSTKDKNVISKYFTRAADESLEDFKETKRIITSPKI 484
           G E+PD+P       SS+ S+   +V S    R+ D+ +ED    KR++ +P +
Sbjct: 585 GTEKPDKPA------SSSASSAPTSVCSS--PRSEDKEVEDMPVLKRVLQAPPL 630


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 25.4 bits (53), Expect = 0.68
 Identities = 13/54 (24%), Positives = 28/54 (51%)
 Frame = +2

Query: 479 KIIKPARKQRKNGKRICKQKDIRTSLKRKNNELIEFSKEFNNVCEKTGIDVDSE 640
           K+I+  +++ K+GKR       + +  + NN ++E      +V  K  +D+D +
Sbjct: 257 KVIQLKKEEYKSGKRNIIDNSAQKTESKTNNIVVEGVSFGQSVGLKDDLDIDDD 310


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 6/47 (12%)
 Frame = +2

Query: 395 NVISKYFTRAA------DESLEDFKETKRIITSPKIIKPARKQRKNG 517
           N   K+F+R++       ESL+ F     + TS  ++ P    R+NG
Sbjct: 243 NKNGKFFSRSSTSRIVISESLKHFTIQSSVTTSKMMVSPRLYDRQNG 289


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,074
Number of Sequences: 438
Number of extensions: 4665
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)