Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_N10
(847 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC29A3.18 |cyt1||cytochrome c1|Schizosaccharomyces pombe|chr 2... 176 4e-45
SPCC1235.06 |sif1||Sad1 interacting factor 1|Schizosaccharomyces... 29 0.83
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 29 0.83
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 0.83
SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyce... 27 2.5
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma... 27 2.5
SPBC2G2.05 |rpl1603|rpl16c|60S ribosomal protein L13/L16|Schizos... 27 3.3
SPBC2F12.14c |gua1||IMP dehydrogenase Gua1 |Schizosaccharomyces ... 27 3.3
SPBC1539.01c |||mitochondrial ribosomal protein subunit L15|Schi... 27 3.3
SPAC23A1.11 |rpl1602|rpl16-2|60S ribosomal protein L13/L16|Schiz... 27 4.4
SPBC839.13c |rpl1601||60S ribosomal protein L13/L16|Schizosaccha... 27 4.4
SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha 3|Sch... 26 7.7
SPCC16A11.14 |sfh1||RSC complex subunit Sfh1 |Schizosaccharomyce... 26 7.7
>SPBC29A3.18 |cyt1||cytochrome c1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 307
Score = 176 bits (428), Expect = 4e-45
Identities = 81/145 (55%), Positives = 100/145 (68%)
Frame = +3
Query: 411 NLVNVTHTEDEAKAEAAEVMIKDGPDEEGNYFERPGKLSDYLPSXXXXXXXXXXXXXXXX 590
+LV VTHT DEAK A+EV +DGPD+EGN F+RPGKLSD+LP
Sbjct: 115 HLVGVTHTADEAKQMASEVEYEDGPDDEGNMFKRPGKLSDFLPPPYPNVEAARASNNGAA 174
Query: 591 XXDLSLICSGRKGGEDYIFALLTGYMEPPAGVVLREGQNYNPYFPGGAISMAQVLFDEAA 770
DLS + GR GG+DYI++LLTGY EPPAGV + +G N+NP+FPG I+MA+ LFD+A
Sbjct: 175 PPDLSCVVRGRHGGQDYIYSLLTGYTEPPAGVEVPDGMNFNPFFPGTQIAMARPLFDDAV 234
Query: 771 EYSDGTPATASQLAKDVATFLKWCS 845
E+ DGTPAT +Q AKDV FL W S
Sbjct: 235 EFEDGTPATTAQAAKDVVNFLHWAS 259
Score = 53.2 bits (122), Expect = 4e-08
Identities = 22/43 (51%), Positives = 29/43 (67%)
Frame = +2
Query: 278 HPPHNPWNHSGWFSSLDHASVRRGYEVYKQVCKACHSLQYIAF 406
H + W S S DHAS+RRG++VY++VC ACHSL IA+
Sbjct: 71 HFIQHDWPQSKVLSGFDHASLRRGFQVYREVCSACHSLNLIAW 113
>SPCC1235.06 |sif1||Sad1 interacting factor 1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 257
Score = 29.1 bits (62), Expect = 0.83
Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 621 RKGGEDY-IFALLTGYMEPPAGVVLREGQNYNPYF 722
R G Y + A L + PP G ++R +Y PYF
Sbjct: 197 RNNGPSYSLLASLASQLPPPYGAMIRHTTSYVPYF 231
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 29.1 bits (62), Expect = 0.83
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -3
Query: 224 QHLHLPLPKWTATLFCFLSILECWWTADKPEA 129
+H ++PLPK A +FC L C++T E+
Sbjct: 822 KHQNIPLPKTCAAIFCGNDELVCFFTIKADES 853
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.1 bits (62), Expect = 0.83
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = -1
Query: 760 SNRTCAIEMAPPGKYGL*FCPSRSTTPAGGSM*PVSSAKM*SSPPLRPEQIRDKS 596
SN +I + P G+ P RS G P+SS++ S+PP P I +S
Sbjct: 345 SNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRS 399
>SPCC297.05 |||diacylglycerol binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 27.5 bits (58), Expect = 2.5
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = -2
Query: 720 SMDCSSVPHVALHQQEVPCNQSVARRCNLRRPYVPSRSETSPVGKHH 580
S D +SV +LH++ + N S R+ + R+PY SE S + K H
Sbjct: 103 SFDHASV--TSLHRRSLSSNTSTPRKYHSRKPY----SEPSVIDKEH 143
>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 358
Score = 27.5 bits (58), Expect = 2.5
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 672 PPAGVVLREGQNYNPYFPGGAISMAQVLFDEAAEYSDGTPATAS 803
P + V +NY PY ++S + +L + S TP TAS
Sbjct: 60 PTSNVASNTSENY-PYTGSKSLSSSSILSNSTISTSSSTPITAS 102
>SPBC2G2.05 |rpl1603|rpl16c|60S ribosomal protein
L13/L16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 197
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/49 (28%), Positives = 21/49 (42%)
Frame = -1
Query: 199 SGQPHFSVFCPSLSVGGQLTSLRPN*TIFFQKTCPTNPTDGGRHV*KPS 53
+GQ V C L++ G + + +K C NP+ G H PS
Sbjct: 30 AGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRYNPSRGAFHFRAPS 78
>SPBC2F12.14c |gua1||IMP dehydrogenase Gua1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 524
Score = 27.1 bits (57), Expect = 3.3
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 651 LLTGYMEPPAGVVLREGQNYNPYFPGGAIS 740
LL G E P +REGQ Y Y G+I+
Sbjct: 395 LLAGTTESPGEYYVREGQRYKSYRGMGSIA 424
>SPBC1539.01c |||mitochondrial ribosomal protein subunit
L15|Schizosaccharomyces pombe|chr 2|||Manual
Length = 210
Score = 27.1 bits (57), Expect = 3.3
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1
Query: 100 TSFEKIWSSLASGLSAV 150
+SFEKI+SS+ SGL AV
Sbjct: 159 SSFEKIYSSIVSGLVAV 175
>SPAC23A1.11 |rpl1602|rpl16-2|60S ribosomal protein
L13/L16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 197
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = -1
Query: 196 GQPHFSVFCPSLSVGGQLTSLRPN*TIFFQKTCPTNPTDGGRHV*KPS 53
GQ V C L++ G + + +K C NP+ G H PS
Sbjct: 31 GQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRYNPSRGAFHFRAPS 78
>SPBC839.13c |rpl1601||60S ribosomal protein
L13/L16|Schizosaccharomyces pombe|chr 2|||Manual
Length = 197
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = -1
Query: 196 GQPHFSVFCPSLSVGGQLTSLRPN*TIFFQKTCPTNPTDGGRHV*KPS 53
GQ V C L++ G + + +K C NP+ G H PS
Sbjct: 31 GQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRYNPSRGAFHFRAPS 78
>SPAC13C5.01c ||SPAC31A2.17c|20S proteasome component alpha
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 248
Score = 25.8 bits (54), Expect = 7.7
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 678 QEVPCNQSVARRCNLRRPY 622
+E+PC Q V R C+L++ Y
Sbjct: 103 EEMPCEQLVRRVCDLKQGY 121
>SPCC16A11.14 |sfh1||RSC complex subunit Sfh1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 418
Score = 25.8 bits (54), Expect = 7.7
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +2
Query: 338 VRRGYEVYKQVCKACHSLQYIAFXKFGQCHPY*RR 442
VRRG E K +C AC +A+ K GQ PY R+
Sbjct: 385 VRRGPEGNKSLCNACG----VAYAKTGQL-PYWRK 414
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,508,655
Number of Sequences: 5004
Number of extensions: 70944
Number of successful extensions: 212
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 418457710
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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