Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_N08
         (917 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0812 + 23383704-23384143,23384902-23385247                      288   4e-78
07_01_1201 - 11419851-11419913,11420090-11420311                       32   0.56 
06_01_0811 - 6113491-6113925,6114079-6114185,6114569-6114788,611...    30   3.0  
03_03_0091 - 14371528-14372661                                         30   3.0  
06_01_0026 + 265755-265968,267319-267468,267694-267738,267786-26...    29   3.9  
01_07_0112 - 41149461-41151674,41151688-41153265,41154344-411555...    29   6.8  

>12_02_0812 + 23383704-23384143,23384902-23385247
          Length = 261

 Score =  288 bits (707), Expect = 4e-78
 Identities = 131/217 (60%), Positives = 162/217 (74%)
 Frame = +1

Query: 157 RRGKALLNFAL*XYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPE 336
           R+G A   F    + ER+GY+KGVV DIIHDPGRGAPLA V FR P+++K +KELF+A E
Sbjct: 23  RKGPA--RFRSLDFGERNGYLKGVVTDIIHDPGRGAPLAKVTFRHPFRYKHQKELFVAAE 80

Query: 337 GLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHN 516
           G+YTGQFVYCG++ATL +GNV+P+ ++PEG +VCN+E  +GDRG  ARASG++A VI HN
Sbjct: 81  GMYTGQFVYCGRRATLSIGNVLPIRSVPEGAVVCNVEHHVGDRGVFARASGDYAIVISHN 140

Query: 517 PDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAXHKYKVXRNCWPYVR 696
           PD   +R+KLPSGAKK++PSS R M+G VAGGGR +KP+LKAG A HKY+V RNCWP VR
Sbjct: 141 PDNGTSRIKLPSGAKKIVPSSCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNCWPKVR 200

Query: 697 GVAXNPXQHPXXGGXHXPIXXXSTXXXXTSAGPXXGL 807
           GVA NP +HP  GG H  I   ST       G   GL
Sbjct: 201 GVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGL 237



 Score = 40.7 bits (91), Expect = 0.002
 Identities = 19/26 (73%), Positives = 20/26 (76%)
 Frame = +3

Query: 114 AQRKGAGSVFVSHTKKRKGAPKLRSL 191
           AQRKGAGSVF SHT  RKG  + RSL
Sbjct: 7   AQRKGAGSVFKSHTHHRKGPARFRSL 32


>07_01_1201 - 11419851-11419913,11420090-11420311
          Length = 94

 Score = 32.3 bits (70), Expect = 0.56
 Identities = 17/62 (27%), Positives = 27/62 (43%)
 Frame = -1

Query: 623 SIRPPPATIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARARRPLSPIFSS 444
           ++ PPP  +P +P     R+   P G        +G  P        A  R+P +P+F S
Sbjct: 12  ALLPPPPPLPALPQGQQWRS-TGPTGKLCFCSFPAGALPPAAGAGQPAPDRQPATPLFPS 70

Query: 443 RL 438
           R+
Sbjct: 71  RV 72


>06_01_0811 -
           6113491-6113925,6114079-6114185,6114569-6114788,
           6115112-6115199,6115301-6115431,6115924-6116099,
           6116465-6116529,6117014-6117094,6117219-6117358,
           6117446-6117532,6117614-6117827,6118102-6118260,
           6118860-6118936,6119629-6119796
          Length = 715

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 606 WRWTY*QTYFESWKGIXQVQG 668
           W WTY  T+F SW  +  +QG
Sbjct: 70  WSWTYWSTFFLSWSIVPTLQG 90


>03_03_0091 - 14371528-14372661
          Length = 377

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
 Frame = -1

Query: 611 PPATIPTMPLLLDGRTFLAPDGS-FTLVRLASGLCPITVAKFPEARARRP-LSPIFSSRL 438
           PPA  P      D      P G+  T      G+ P + A    A A    L+P+F   +
Sbjct: 254 PPAPAPAPVKAEDALPHFFPQGAAVTATAHVHGVDPASAAASAAANAEGGILAPLFKEMV 313

Query: 437 HTMVPSGIAPTGITFP 390
             M+ +G+AP  +  P
Sbjct: 314 RAMLTAGMAPPSLEPP 329


>06_01_0026 +
           265755-265968,267319-267468,267694-267738,267786-268460,
           268779-268843,268854-269073,269163-269438,269547-269663,
           269776-269853,269930-270184,270235-270323,270403-270816
          Length = 865

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +3

Query: 483 LWKLRHCDWT 512
           LWK RHCDWT
Sbjct: 73  LWKCRHCDWT 82


>01_07_0112 -
           41149461-41151674,41151688-41153265,41154344-41155507,
           41155807-41156293,41156603-41156759,41157303-41157378
          Length = 1891

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -2

Query: 514 CVQSQWRSFQRHVPDDLYHPFSLQDCTQWY 425
           C    W++   H+P  L H  +  +C  WY
Sbjct: 73  CSCGLWKATTHHLPSALCHGLNYVNCAMWY 102


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,498,338
Number of Sequences: 37544
Number of extensions: 456892
Number of successful extensions: 1147
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2612387020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)