Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_N08
(917 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical pr... 308 4e-84
AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical ... 36 0.041
Z83238-4|CAB05795.1| 341|Caenorhabditis elegans Hypothetical pr... 30 2.7
U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in bl... 29 3.5
U64859-8|AAC69096.1| 378|Caenorhabditis elegans Prion-like-(q/n... 29 3.5
Z81589-11|CAI58924.1| 330|Caenorhabditis elegans Hypothetical p... 28 8.1
Z81555-8|CAB04512.2| 330|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical pr... 28 8.1
>Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical
protein B0250.1 protein.
Length = 260
Score = 308 bits (756), Expect = 4e-84
Identities = 134/204 (65%), Positives = 162/204 (79%)
Frame = +1
Query: 196 YAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKK 375
YAERHGYIKG+VKDIIHDPGRGAPLA++ FRDPYK+KT K +A EG++TGQF++CG K
Sbjct: 34 YAERHGYIKGLVKDIIHDPGRGAPLAIIAFRDPYKYKTVKTTVVAAEGMHTGQFIHCGAK 93
Query: 376 ATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSG 555
A +++GN++PVG +PEGT +CN+E K GDRG +ARASGN+ATVI HNPD K+TR++LPSG
Sbjct: 94 AQIQIGNIVPVGTLPEGTTICNVENKSGDRGVIARASGNYATVIAHNPDTKKTRIRLPSG 153
Query: 556 AKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAXHKYKVXRNCWPYVRGVAXNPXQHPXXG 735
AKKV+ S NR M+G+VAGGGR DKP+LKAGR+ HKYK RN WP VRGVA NP +HP G
Sbjct: 154 AKKVVQSVNRAMIGLVAGGGRTDKPLLKAGRSYHKYKAKRNSWPRVRGVAMNPVEHPHGG 213
Query: 736 GXHXPIXXXSTXXXXTSAGPXXGL 807
G H I ST SAG GL
Sbjct: 214 GNHQHIGHPSTVRRDASAGKKVGL 237
Score = 40.3 bits (90), Expect = 0.002
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = +3
Query: 117 QRKGAGSVFVSHTKKRKGAPKLRSL 191
QRKGAG +F SH K RKGA KLR L
Sbjct: 8 QRKGAGGIFKSHNKHRKGASKLRPL 32
>AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical
protein F56B3.8 protein.
Length = 321
Score = 35.9 bits (79), Expect = 0.041
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 391 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 549
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLP 211
>Z83238-4|CAB05795.1| 341|Caenorhabditis elegans Hypothetical
protein T08G3.5 protein.
Length = 341
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/63 (25%), Positives = 32/63 (50%)
Frame = +1
Query: 139 FSFLTRRRGKALLNFAL*XYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKE 318
+S +T+ AL N ++ ++ HG +V ++H P R A L ++ + K T +
Sbjct: 263 YSAVTKNLDIALTNISMICFST-HGLFSTIVMLVVHKPYRQATLQILKIKRIEKIGTANK 321
Query: 319 LFI 327
+F+
Sbjct: 322 VFL 324
>U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 9 protein.
Length = 378
Score = 29.5 bits (63), Expect = 3.5
Identities = 24/89 (26%), Positives = 30/89 (33%)
Frame = -2
Query: 703 QHHVHMASSYVXPCTCXMPFQLSK*VCQYVHLQQQYRPCLCCLMAEPSWLQTVALLLYA* 524
+ H A C+C Q CQ +QQQ C C A+P QTV +
Sbjct: 24 KRHCGCAQPQQSQCSCQQVQQTQSCSCQSAPVQQQAPSCSC---AQPQQTQTVQVQSTQC 80
Query: 523 HQDCVQSQWRSFQRHVPDDLYHPFSLQDC 437
C QS + Q P Q C
Sbjct: 81 APACQQSCRQQCQSAPAVSQCQPMCQQQC 109
>U64859-8|AAC69096.1| 378|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 57
protein.
Length = 378
Score = 29.5 bits (63), Expect = 3.5
Identities = 24/89 (26%), Positives = 30/89 (33%)
Frame = -2
Query: 703 QHHVHMASSYVXPCTCXMPFQLSK*VCQYVHLQQQYRPCLCCLMAEPSWLQTVALLLYA* 524
+ H A C+C Q CQ +QQQ C C A+P QTV +
Sbjct: 24 KRHCGCAQPQQSQCSCQQVQQTQSCSCQSAPVQQQAPSCSC---AQPQQTQTVQVQSTQC 80
Query: 523 HQDCVQSQWRSFQRHVPDDLYHPFSLQDC 437
C QS + Q P Q C
Sbjct: 81 APACQQSCRQQCQSAPAVSQCQPMCQQQC 109
>Z81589-11|CAI58924.1| 330|Caenorhabditis elegans Hypothetical
protein F58E10.6 protein.
Length = 330
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 208 HGYIKGVVKDIIHDPGRGAPLAVVHFR 288
HG + +V I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311
>Z81555-8|CAB04512.2| 330|Caenorhabditis elegans Hypothetical
protein F58E10.6 protein.
Length = 330
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 208 HGYIKGVVKDIIHDPGRGAPLAVVHFR 288
HG + +V I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311
>Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical
protein T24B8.1 protein.
Length = 134
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 505 IGHNPDAKRTRVKLPSGAKKVL 570
IGH D +RTR LP+G KKVL
Sbjct: 57 IGHGSD-RRTRFVLPNGYKKVL 77
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,808,942
Number of Sequences: 27780
Number of extensions: 382108
Number of successful extensions: 906
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 906
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2349764032
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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