Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_N04
         (852 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    26   0.38 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   1.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   1.5  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   4.7  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   8.2  

>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 26.2 bits (55), Expect = 0.38
 Identities = 12/46 (26%), Positives = 21/46 (45%)
 Frame = -2

Query: 557 QREQRYPTEDDERDPVEARPHVREAPQQHAELQRVHQVLHQEQSAQ 420
           Q   +  T+     P + + H  +A QQH +    H +  Q+Q +Q
Sbjct: 167 QMHHQMHTQHPHMQPQQGQ-HQSQAQQQHLQAHEQHMMYQQQQQSQ 211


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +3

Query: 276 KNVLQAVQKTNDGHPFKWL 332
           + +L+A +++N   PF+WL
Sbjct: 210 RGILEAARRSNLSQPFQWL 228


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +3

Query: 276 KNVLQAVQKTNDGHPFKWL 332
           + +L+A +++N   PF+WL
Sbjct: 300 RGILEAARRSNLSQPFQWL 318


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 528 ILGWIALFTLPKAYEMNKAQVDANLELAR 614
           I+G I L  +  AY+ ++ +    +ELAR
Sbjct: 834 IIGGIGLIIIEVAYKKHQIRKQKKMELAR 862


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 10/25 (40%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
 Frame = +2

Query: 77  RFTS--QADLPPRWTSGVVDLLAER 145
           R+T+  Q  +PPRW     D+  ER
Sbjct: 699 RYTAKLQVKVPPRWIVEPTDVSVER 723


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,651
Number of Sequences: 438
Number of extensions: 1762
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)