Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_N03
(892 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC144.08 |||DNAJ domain protein Jac1 |Schizosaccharomyces pomb... 45 2e-05
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 41 2e-04
SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit ... 39 8e-04
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 35 0.014
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 35 0.018
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 34 0.031
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 33 0.072
SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit Prp1|... 31 0.22
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 31 0.22
SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyce... 29 0.89
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 29 0.89
SPCC24B10.03 |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 27 3.6
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 27 4.7
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 27 4.7
SPAC3H8.02 |||sec14 cytosolic factor family|Schizosaccharomyces ... 26 8.3
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 26 8.3
>SPAC144.08 |||DNAJ domain protein Jac1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 225
Score = 44.8 bits (101), Expect = 2e-05
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +3
Query: 378 YDLNENDLAKKYKDLQKYLHPDKYANRFKEEQEISEKYSSLVNEAYKTLLEPLARGIYML 557
+D++ L Y K LHPD + + ++++ S+ +++AY TL PL R Y+L
Sbjct: 79 FDIDLGALKSSYLRKMKTLHPDVAQGK---DAALAQRDSAELSKAYNTLKAPLTRAEYIL 135
Query: 558 QLRG-KDIPEK-TEVDQKFLMKIM 623
QL+G + E + D +FLM+IM
Sbjct: 136 QLQGINPVSEDISNSDPEFLMEIM 159
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 41.1 bits (92), Expect = 2e-04
Identities = 24/72 (33%), Positives = 38/72 (52%)
Frame = +3
Query: 327 KPNKEDNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRFKEEQEISEKYSSLVN 506
K +K +++KI+GVS+ + + ++ K Y+ L HPDK A + E E V
Sbjct: 343 KKSKRKDHYKILGVSK--EATDIEIKKAYRKLALVYHPDKNAGNLEAEARFKE-----VG 395
Query: 507 EAYKTLLEPLAR 542
EAY L +P +R
Sbjct: 396 EAYTILSDPESR 407
>SPBC36B7.03 |sec63||ER protein translocation subcomplex subunit
Sec63 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 39.1 bits (87), Expect = 8e-04
Identities = 28/94 (29%), Positives = 45/94 (47%)
Frame = +3
Query: 315 NALQKPNKEDNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRFKEEQEISEKYS 494
N+ K N D Y +I+G+++ ++ D+ + YK L HPDK N +E EK+
Sbjct: 89 NSRLKLNIWDPY-EILGIAKGTSVD--DVRRHYKRLSIKFHPDKVRNMVNTTREEVEKHY 145
Query: 495 SLVNEAYKTLLEPLARGIYMLQLRGKDIPEKTEV 596
+ AY+ L + R Y L D+P+ V
Sbjct: 146 IEITNAYRALTDDKTRENYAL-YGTPDVPQHISV 178
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 35.1 bits (77), Expect = 0.014
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = +3
Query: 378 YDLNENDLAKKYKDLQKYLHPDKYANRFKEEQEISEKYSSLVNEAYKTLLEPLARGIY 551
++ + ++ K YK L HPDK E++E +E++ V EAY L +P +R +Y
Sbjct: 15 FEASAEEIKKSYKRLALLHHPDKAP--IHEKEEAAERFRG-VQEAYDILKDPESREMY 69
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 34.7 bits (76), Expect = 0.018
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +3
Query: 336 KEDNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRFKEEQEISEKYSSLVNE 509
KE ++++ V T ++ +L K Y+ L HPDK N + +EIS Y L +E
Sbjct: 3 KETKLYEVLNVDVT--ASQAELKKAYRKLALKYHPDKNPNAGDKFKEISRAYEILADE 58
>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 33.9 bits (74), Expect = 0.031
Identities = 23/69 (33%), Positives = 36/69 (52%)
Frame = +3
Query: 345 NYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRFKEEQEISEKYSSLVNEAYKTL 524
+Y+ I+ +S D + + + K Y+ L HPDK NR + + EK+ L EAY+ L
Sbjct: 9 DYYDILNIS--VDADGDTIKKSYRRLAILYHPDK--NR-ENPEAAREKFQKLA-EAYQVL 62
Query: 525 LEPLARGIY 551
+P R Y
Sbjct: 63 SDPKLREKY 71
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 32.7 bits (71), Expect = 0.072
Identities = 19/72 (26%), Positives = 36/72 (50%)
Frame = +3
Query: 336 KEDNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRFKEEQEISEKYSSLVNEAY 515
K Y++I+ + +T + ++ K YK L LHPD K +++ +V++A+
Sbjct: 110 KNHQYYEILDLKKT--CTDTEIKKSYKKLALQLHPD------KNHAPSADEAFKMVSKAF 161
Query: 516 KTLLEPLARGIY 551
+ L +P R Y
Sbjct: 162 QVLSDPNLRAHY 173
>SPBC6B1.07 |prp1|zer1|U4/U6 x U5 tri-snRNP complex subunit
Prp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 906
Score = 31.1 bits (67), Expect = 0.22
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +3
Query: 378 YDLNENDLAKKYKDLQKYLHPDKYANRFKEEQEISEKYSSLVNEAYKTLLEPLARGIYML 557
YD + + K Y+ ++++L + + R K+EQ EKY N + L RG+ L
Sbjct: 82 YDHEDEEADKIYQSVEEHLSKRRKSQREKQEQLQKEKYEK-ENPKVSSQFADLKRGLSTL 140
Query: 558 QLRG-KDIPEKTEVDQK 605
+IPE ++ +K
Sbjct: 141 TDEDWNNIPEPGDLTRK 157
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 31.1 bits (67), Expect = 0.22
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 381 DLNENDLAKKYKDLQKYLHPDKYANRFKEEQEISEKYSSLVNEAYKTLLE 530
+ +E +L K Y+ L HPDK N K+ +EIS Y L + + L +
Sbjct: 16 EASEAELKKAYRKLALKYHPDKNPNGEKKFKEISLAYEVLSDPQRRKLYD 65
>SPAC20G8.06 |||CCR4-Not complex subunit Not1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2100
Score = 29.1 bits (62), Expect = 0.89
Identities = 13/59 (22%), Positives = 28/59 (47%)
Frame = +3
Query: 438 PDKYANRFKEEQEISEKYSSLVNEAYKTLLEPLARGIYMLQLRGKDIPEKTEVDQKFLM 614
P + N EISE +S +AY+ L+E + + + D+ K +++ + ++
Sbjct: 1531 PGNFVNSITSLYEISESFSGETKQAYEQLVETMNKSVSPASEILSDLDNKQQLNDQIII 1589
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 29.1 bits (62), Expect = 0.89
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 393 NDLAKKYKDLQKYLHPDKYANRFKEEQEISEKYSSLVNEAYKTLL 527
ND+ +KY +L K HPDK N + S + NE Y LL
Sbjct: 46 NDIKRKYIELVKKHHPDKMKNASQLAPTESPPEINKHNEEYFRLL 90
>SPCC24B10.03 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 128
Score = 27.1 bits (57), Expect = 3.6
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 426 KYLHPDKYANRFKEEQEISEKYSSLVNEAYKT-LLEPLARGIYMLQLRGKDIPEKTEVDQ 602
++LH D NR E+ EIS L+NE ++ LL + + +GK KT+ ++
Sbjct: 37 RWLHLDARMNRNIEDLEISNYNLRLMNEQLESQLLSLNVKPVVSFAEQGKSSESKTD-EE 95
Query: 603 KFLM 614
F++
Sbjct: 96 GFIL 99
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +3
Query: 357 IMGVSETYDLNENDLAKKYKDLQKYLHPDKYANRFKE 467
+MG+ T D N L + D QK++H Y +R ++
Sbjct: 453 LMGIIHTSDRNLALLVGRSLDAQKFIHDVTYDHRLRD 489
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 26.6 bits (56), Expect = 4.7
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +3
Query: 267 GKDPKTLVVNLFCSNCNALQKPNKEDNYFKIMGVSETYDLNENDLAKKYKDLQKYLHPDK 446
G D ++ ++ A +K +D Y K + ETY+ + N L ++ ++L +
Sbjct: 35 GNDYESSMIQSQIQEIEAFRK-TVDDMYEKQKSIRETYEKDINKLKRELEELGVEANTAS 93
Query: 447 YANR 458
Y NR
Sbjct: 94 YRNR 97
>SPAC3H8.02 |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 444
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +3
Query: 405 KKYKDLQKYLHPDKYANRF 461
+ Y+DLQ+Y++PD F
Sbjct: 304 RNYRDLQQYINPDNILKEF 322
>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1489
Score = 25.8 bits (54), Expect = 8.3
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +2
Query: 173 ENLKMNFLRI--LSNKSTKLYITHQCSFYLL 259
E LK+N L + L+N S K +QC FY+L
Sbjct: 795 EYLKINTLSMKSLNNSSRKFLELYQCFFYVL 825
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,090,609
Number of Sequences: 5004
Number of extensions: 60605
Number of successful extensions: 195
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 195
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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