Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_N03
         (892 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    27   0.23 
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     27   0.23 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    25   0.93 
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              23   4.9  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    22   8.6  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   8.6  

>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 27.1 bits (57), Expect = 0.23
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +3

Query: 99  FFKVIRFESRDHLECCNTFHNI 164
           +FKV+  E  D +ECC    NI
Sbjct: 187 YFKVVVVEDVDSVECCGALKNI 208


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 27.1 bits (57), Expect = 0.23
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 259 QQIKRTLVCYVQFCTFVRQNSKEIH 185
           + +K  L+   Q CTF+  N KE+H
Sbjct: 108 ESLKNVLLWDFQECTFISVNGKEVH 132


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 25.0 bits (52), Expect = 0.93
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 350 VIVFFVWFLKGITVRTKEVHDQGFR 276
           V++FF W +    V T +  +QGFR
Sbjct: 262 VMLFFYWRIYNAAVSTTKAINQGFR 286


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 9/30 (30%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
 Frame = -1

Query: 280 FGSFPQDQQIKRTLVCYVQ-FCTFVRQNSK 194
           +G FP+D+++K    C ++ F    ++N K
Sbjct: 59  YGEFPEDEKLKCYFNCVLEKFNVMDKKNGK 88


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 12/45 (26%), Positives = 23/45 (51%)
 Frame = +3

Query: 390 ENDLAKKYKDLQKYLHPDKYANRFKEEQEISEKYSSLVNEAYKTL 524
           E +  K  K+ +KY    K  +R + E+E S +   + + + KT+
Sbjct: 46  EQNSYKNEKEYRKYRETSKERSRDRTERERSREPKIISSLSNKTI 90


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -3

Query: 320  GITVRTKEVHDQ 285
            GIT+RT EVH++
Sbjct: 1119 GITLRTAEVHNR 1130


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,825
Number of Sequences: 438
Number of extensions: 4302
Number of successful extensions: 13
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)