Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_N02
         (878 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0469 - 3359156-3359500,3359595-3359680,3359766-3359811,335...   123   2e-28
02_04_0100 - 19730137-19730237,19731215-19731344,19731419-197315...   121   9e-28
04_03_0871 - 20441689-20441756,20442220-20442349,20442422-204425...   120   2e-27
02_01_0045 + 307058-307552,308670-308716,308779-308866,309664-30...    41   0.001
05_05_0050 + 21916020-21916489,21916906-21917380,21917472-21918278     29   6.5  

>02_01_0469 -
           3359156-3359500,3359595-3359680,3359766-3359811,
           3359897-3360016,3360622-3360624
          Length = 199

 Score =  123 bits (297), Expect = 2e-28
 Identities = 60/79 (75%), Positives = 67/79 (84%)
 Frame = +2

Query: 98  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 277
           M+ RK +  KEE  VTLGP    GE VFGVAHIFASFNDTF+HVTDLSGRET+ R+TGGM
Sbjct: 1   MSKRKTREPKEE-NVTLGPTVREGEYVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGM 59

Query: 278 KVKADRDEASPYAAMLAAQ 334
           KVKADRDE+SPYAAMLA+Q
Sbjct: 60  KVKADRDESSPYAAMLASQ 78


>02_04_0100 -
           19730137-19730237,19731215-19731344,19731419-19731504,
           19732410-19732455,19732558-19732680,19732779-19732781
          Length = 162

 Score =  121 bits (291), Expect = 9e-28
 Identities = 58/79 (73%), Positives = 65/79 (82%)
 Frame = +2

Query: 98  MAPRKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGM 277
           M+ RK     +E  VTLGP    GE VFGVAHIFASFNDTF+HVTDLSGRET+ R+TGGM
Sbjct: 1   MSGRKKTREPKEENVTLGPTVREGEYVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGM 60

Query: 278 KVKADRDEASPYAAMLAAQ 334
           KVKADRDE+SPYAAMLA+Q
Sbjct: 61  KVKADRDESSPYAAMLASQ 79


>04_03_0871 -
           20441689-20441756,20442220-20442349,20442422-20442507,
           20444271-20444316,20444425-20444547,20445302-20445370
          Length = 173

 Score =  120 bits (289), Expect = 2e-27
 Identities = 58/76 (76%), Positives = 65/76 (85%)
 Frame = +2

Query: 107 RKNKVAKEEVQVTLGPQHLVGETVFGVAHIFASFNDTFVHVTDLSGRETIARVTGGMKVK 286
           +K +  KEE  VTLGP    GE VFGVAHIFASFNDTF+HVTDLSGRET+ R+TGGMKVK
Sbjct: 27  KKTREPKEE-NVTLGPTVREGEYVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVK 85

Query: 287 ADRDEASPYAAMLAAQ 334
           ADRDE+SPYAAMLA+Q
Sbjct: 86  ADRDESSPYAAMLASQ 101


>02_01_0045 +
           307058-307552,308670-308716,308779-308866,309664-309756,
           309788-309950,310554-310627,310889-310927
          Length = 332

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 18/24 (75%), Positives = 21/24 (87%)
 Frame = +2

Query: 263 VTGGMKVKADRDEASPYAAMLAAQ 334
           V GGMK+KAD DE+SPYAAML +Q
Sbjct: 211 VGGGMKIKADCDESSPYAAMLVSQ 234


>05_05_0050 + 21916020-21916489,21916906-21917380,21917472-21918278
          Length = 583

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 16/59 (27%), Positives = 29/59 (49%)
 Frame = -3

Query: 633 IVFFFKCIQLKTIDIKYYCNRSQIYYTFLKRRLIK*VPSYKYIFINRVKCTKTVHKIKL 457
           I F   C  L+ ++++  C   Q        R I+ +PS +Y+++   K +KT H + L
Sbjct: 472 IRFALGCENLRKLELRSCCFSEQAL-----ARAIRSMPSLRYVWVQGYKASKTGHDLML 525


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,903,728
Number of Sequences: 37544
Number of extensions: 404756
Number of successful extensions: 746
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 737
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)