Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_N02
         (878 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    25   1.2  
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    25   1.2  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    24   1.6  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       24   2.1  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    23   4.9  

>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 10/37 (27%), Positives = 17/37 (45%)
 Frame = -3

Query: 672 LLSFM*CRFIFMCIVFFFKCIQLKTIDIKYYCNRSQI 562
           ++S + C F F+ ++         T+ IK  C R  I
Sbjct: 1   MISMLRCTFFFLSVILITSYFVTPTMSIKCNCKRHVI 37



 Score = 24.2 bits (50), Expect = 1.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -3

Query: 492 VKCTKTVHKIKLHLCEKI 439
           +KC    H IK H+C KI
Sbjct: 28  IKCNCKRHVIKPHICRKI 45


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = -3

Query: 579 CNRSQIYYTFLKRRLIK*VPSYKYIFINRVKCTKTVHKIKLHL 451
           C+ S +  + L   L      Y+Y   N    TK  H +KLHL
Sbjct: 22  CSYSCVNKSMLNSHLKSHSNVYQYRCANCTYATKYCHSLKLHL 64


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +3

Query: 390 SLSTMFIIFCQPSSTF 437
           S  T+F I+ QPS+TF
Sbjct: 129 SYGTLFFIYVQPSATF 144


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 306 DASSRSAFTFMPPVTRAIVSRPDKSVT 226
           +A  R  FT+   + ++I+  PDK +T
Sbjct: 500 NADVRPPFTYASLIRQSIIESPDKQLT 526


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +3

Query: 390 SLSTMFIIFCQPSSTFQ-SFHKDAI*FYVQFLYIL 491
           S  T+F I+  PS+TF    +K    FY   + +L
Sbjct: 130 SYGTLFFIYVHPSATFSLDLNKVVSVFYTAVIPML 164


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,773
Number of Sequences: 438
Number of extensions: 4805
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)