Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_M23
         (934 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0647 - 19687142-19687145,19687244-19689352,19689764-19690617     29   4.0  
01_01_0866 - 6765761-6766413,6766805-6766906,6767693-6768965           29   4.0  
12_01_0378 - 2946916-2947590                                           28   9.2  

>08_02_0647 - 19687142-19687145,19687244-19689352,19689764-19690617
          Length = 988

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 17/73 (23%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
 Frame = +3

Query: 165 DILEEQLYNSVVVADY--DSAVEKSKHLYEEKKSEVITNVVNKLIRNNKMNCMEYAYQLW 338
           DIL E LY S  ++DY  D      ++L +  +   + N++ + ++NN+   +     +W
Sbjct: 237 DILSEVLYTSNPMSDYQKDHFWRIKENLNQPLEDHQLINMIKEYLKNNRYFIV--IDDIW 294

Query: 339 LQGSKDIVRDCFP 377
            + +  +++  FP
Sbjct: 295 SKSAWQVIQCAFP 307


>01_01_0866 - 6765761-6766413,6766805-6766906,6767693-6768965
          Length = 675

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = -3

Query: 401 GEDKSELNWETIPDDVLGALEPKLIGVLHAVHLVVSYQFVH 279
           GED++ LNWET     LGA      G+ H +H   + +FVH
Sbjct: 462 GEDRTPLNWETRVRIALGAAR----GIAH-IHTENNGKFVH 497


>12_01_0378 - 2946916-2947590
          Length = 224

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 14/47 (29%), Positives = 27/47 (57%)
 Frame = +3

Query: 75  GLDAPKMKPAIVILCLFVASLYAADSDVPNDILEEQLYNSVVVADYD 215
           G+    ++P +++L    ASL AA++ VP    + ++  +VV  D+D
Sbjct: 87  GVHYDAIRPRLLLLLAGGASLGAANATVPGVFHQPRMSTTVVAIDFD 133


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,365,430
Number of Sequences: 37544
Number of extensions: 391251
Number of successful extensions: 1163
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1163
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)