Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_M20
(874 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.37
SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase Shk1|Schizosacc... 29 0.86
SPAC167.02 |ptb1||geranylgeranyltransferase II beta subunit |Sch... 28 1.5
SPCC1322.04 |||UTP-glucose-1-phosphate uridylyltransferase |Schi... 27 2.6
SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|c... 27 4.6
SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces pomb... 27 4.6
SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy... 26 6.1
SPBC1685.06 |cid11||poly|Schizosaccharomyces pombe|chr 2|||Manual 26 6.1
SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyce... 26 8.1
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 30.3 bits (65), Expect = 0.37
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = -1
Query: 562 SPARWPRSTPQRSS--DRSASSIAPLGSSVLKLPMNATPMDLELYP*VCAPTCSQPEPSY 389
S R P S P R S S +S P+ S +P + P P V +P + PS
Sbjct: 135 SELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP-VKSPPSAPSLPSA 193
Query: 388 TLPLPPTRNEGPMSQ 344
P+PP P+SQ
Sbjct: 194 VPPMPPKVPPPPLSQ 208
>SPBC1604.14c |shk1|pak1, orb2|PAK-related kinase
Shk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 658
Score = 29.1 bits (62), Expect = 0.86
Identities = 19/53 (35%), Positives = 27/53 (50%)
Frame = -1
Query: 535 PQRSSDRSASSIAPLGSSVLKLPMNATPMDLELYP*VCAPTCSQPEPSYTLPL 377
P+ S+++ S++ L SS P +AT LYP APT P S + PL
Sbjct: 219 PRESTEKPLLSVSALSSSSHLQPTSATSSSSRLYPSRPAPT--PPASSSSSPL 269
>SPAC167.02 |ptb1||geranylgeranyltransferase II beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 311
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/37 (35%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Frame = -3
Query: 698 YAVIMLRVLDGVHVLQPLRPASYLV-VELPAGALRGN 591
YAV +L +LD +HV+ + ASY++ ++ G+++G+
Sbjct: 86 YAVQVLAMLDSLHVVDKDKVASYIIGLQNEDGSMKGD 122
>SPCC1322.04 |||UTP-glucose-1-phosphate uridylyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 506
Score = 27.5 bits (58), Expect = 2.6
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 85 LDMDPPPLGRLYSRSLSA-RFSQK*QPIATSSVKS 186
+D+ P PLGR +S+S SA F IA S++K+
Sbjct: 1 MDLAPRPLGRQHSKSQSAFAFDNTATSIAASTMKN 35
>SPBC2D10.04 |||arrestin Aly1 related|Schizosaccharomyces pombe|chr
2|||Manual
Length = 658
Score = 26.6 bits (56), Expect = 4.6
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 8/74 (10%)
Frame = -1
Query: 586 CRCATAR*SPARWPRSTPQR-------SSDRSASSIAPLGSSVLKLPM-NATPMDLELYP 431
CR AT P T Q S+ R A++ + + ++P N P D +
Sbjct: 532 CRLATTHVEPTEVTAFTTQSVLASSAPSAGRPAAAQISRPAQLFRIPSTNPPPFDGD--- 588
Query: 430 *VCAPTCSQPEPSY 389
VC P C+ P P+Y
Sbjct: 589 -VCPPACNTPPPNY 601
>SPBC1703.14c |top1||DNA topoisomerase I|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 814
Score = 26.6 bits (56), Expect = 4.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 580 TDSSLPLRAPAGSSTTRYDAGLSGWRTWTPSRTRN 684
TD S+PLRA + S T Y + L + T +R+ N
Sbjct: 138 TDDSVPLRAVSTVSLTPYKSELPSGASTTQNRSPN 172
>SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 613
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 128 EREYNLPSGGGSMSRSGACQARQARGNQNLKEFPIV 21
+ E+ P+G + A QA GN N+K FP V
Sbjct: 435 DSEWLWPNGNSLVQTYERVVAAQAAGNTNVKGFPYV 470
>SPBC1685.06 |cid11||poly|Schizosaccharomyces pombe|chr 2|||Manual
Length = 478
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = -1
Query: 370 TRNEGPMSQYCKASMWLVWIFRTSSSQPAS 281
T+ P Y WLVW +S PAS
Sbjct: 447 TQGSAPPWHYIPCQSWLVWYPSEDASNPAS 476
>SPCC1494.10 ||SPCC70.01|transcription factor |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 964
Score = 25.8 bits (54), Expect = 8.1
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Frame = +2
Query: 32 IP*DFDCRVLDVLGTRRSSTWTRLHSADCTRARSQLASHRNSSRLRRRQ-*KAMGRFDPG 208
+P FD L+ G + SS+++ LH+ + + N+ R R + + P
Sbjct: 777 MPQSFDTSSLNAPGAKDSSSFSSLHAQPGKSGIATMGVADNTIRTTERSTFSEIMKDSPS 836
Query: 209 ARVVPGAAREP 241
A PGA P
Sbjct: 837 AHASPGAKTSP 847
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,049,789
Number of Sequences: 5004
Number of extensions: 63392
Number of successful extensions: 199
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 199
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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