Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_M20
         (874 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13072-7|AAK31398.2|  382|Caenorhabditis elegans Nematode astaci...    29   5.7  
Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical pr...    28   7.6  
U88170-4|AAB42245.2|  425|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>U13072-7|AAK31398.2|  382|Caenorhabditis elegans Nematode astacin
           protease protein 7 protein.
          Length = 382

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = -1

Query: 301 SSSQPASVLQKGVTVC-WTMTRLTGRARYDTCTGIKPSHC 185
           +S++P+S  +  +TVC WT  R    A Y   + + P  C
Sbjct: 340 NSNKPSSQCEDRITVCWWTADRCRSPAIYQVMSSLCPKTC 379


>Z81573-1|CAB04625.3|  909|Caenorhabditis elegans Hypothetical
           protein M02G9.1 protein.
          Length = 909

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 28/136 (20%), Positives = 58/136 (42%), Gaps = 7/136 (5%)
 Frame = -1

Query: 427 VCAPTCSQPEPSYTLPLPPTRNEGPMSQYCKASMWLVWIFRTSSSQPASVLQKGVTVCWT 248
           VCA  C + +P+   P P    + P+ Q  +A +  V +   ++S P+      +T+ + 
Sbjct: 568 VCASECPRTQPTVQQPAPQLVQQ-PIYQTVQAPLSYVPVVPVATSAPSQASGPQITINFA 626

Query: 247 MTR---LTGRARYDTCTGIKP-SHCFLLTTS--QSAAISVRSELRASASTICRVEAGP-C 89
           +     +  ++    C    P  HC  +  S  Q+A  +    ++A+ +  C+ +  P C
Sbjct: 627 VPECIPVCEQSCNTQCVEKFPQEHCGSVCNSQCQTACATQTPAVQAAPAPSCQPQCQPAC 686

Query: 88  RGAARAKHVKHAAIKI 41
                A+  +   I+I
Sbjct: 687 EPVCIAQQAQPVRIQI 702


>U88170-4|AAB42245.2|  425|Caenorhabditis elegans Hypothetical
           protein C10G11.6 protein.
          Length = 425

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 16/55 (29%), Positives = 29/55 (52%)
 Frame = -1

Query: 427 VCAPTCSQPEPSYTLPLPPTRNEGPMSQYCKASMWLVWIFRTSSSQPASVLQKGV 263
           + +P   +P PS ++PLPP  +  P S Y  ++  +    ++S+S   S L K +
Sbjct: 172 IVSPDVRRPPPSLSIPLPP-MHIPPPSVYFISTPSIYSTAKSSTSTVTSKLSKAI 225


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,622,418
Number of Sequences: 27780
Number of extensions: 394732
Number of successful extensions: 1467
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1467
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)