Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_M20
         (874 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    27   0.30 
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    26   0.52 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.8  
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              22   6.4  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 26.6 bits (56), Expect = 0.30
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
 Frame = +3

Query: 198 LIPVHVSYLARP-VSLVIVQHTVTPFCRTDAGCEELVRNIQTNHMEALQYWDIGPSFLVG 374
           ++ + V Y++ P +S+       TP  R  A  E+ +     N +   Q     P+FL  
Sbjct: 181 ILAIKVYYISCPEISVNFAHFPATPTGREVALIEQTIGTCVANAVVIEQ-----PTFLCK 235

Query: 375 GNGKVYEGSGWLH 413
           G+GK Y  SG  H
Sbjct: 236 GDGKWYLPSGGCH 248


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 25.8 bits (54), Expect = 0.52
 Identities = 26/72 (36%), Positives = 32/72 (44%), Gaps = 12/72 (16%)
 Frame = -3

Query: 584 SVRHGAVVPREVAALHAAAQQRPQ-RLQHRAA--------RLVRVEVA---DECDSDGPR 441
           +VR G V  RE A + AA QQ    R Q +A         RL+   V    D CD    +
Sbjct: 137 AVRFGRVPKREKARILAAMQQSSHSRSQEKAVAAELEDEQRLLATVVQAHLDTCDFTRDK 196

Query: 440 VVPVGVRADVQP 405
           V P+ VRA   P
Sbjct: 197 VAPILVRARETP 208


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 12/45 (26%), Positives = 21/45 (46%)
 Frame = +3

Query: 63  TCLARAAPRHGPASTRQIVLALALSSLLTEIAADCDVVSKKQWDG 197
           T L R+           +   + + +LLT  A D +V++ K W+G
Sbjct: 29  TYLVRSRTLTSLGDLSDVHTGILIKALLTVQAKDSNVLAAKVWNG 73


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 388 TLPLPPTRNEGPMSQY 341
           T+P+P   N+G ++QY
Sbjct: 55  TIPVPQAANKGMINQY 70


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 215,173
Number of Sequences: 438
Number of extensions: 4705
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)