Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_M18
(892 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1805.16c |||purine nucleoside phosphorylase |Schizosaccharom... 253 2e-68
SPBC12D12.06 |srb11||cyclin CycC|Schizosaccharomyces pombe|chr 2... 28 2.1
SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase protein... 28 2.1
SPBC800.11 |||inosine-uridine preferring nucleoside hydrolase |S... 27 2.7
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 27 3.6
SPBC2A9.12 |orc6|SPBC2D10.02|origin recognition complex subunit ... 27 4.7
SPCC1682.11c |||DUF580 family protein|Schizosaccharomyces pombe|... 27 4.7
SPBC609.05 |pob3||FACT complex component Pob3|Schizosaccharomyce... 26 6.3
SPAC25B8.08 |||conserved fungal family|Schizosaccharomyces pombe... 26 6.3
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 26 6.3
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 8.3
SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated heterochr... 26 8.3
SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual 26 8.3
>SPAC1805.16c |||purine nucleoside phosphorylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 315
Score = 253 bits (620), Expect = 2e-68
Identities = 117/254 (46%), Positives = 165/254 (64%), Gaps = 6/254 (2%)
Frame = +3
Query: 117 YETLVETANFLLSRISE---KPNIGIICGSGMGSLAESIADGV-RIPYEDIPNFPISTVE 284
Y +E +++ ++ E KP + IICGSG+G+LA ++ V +PYEDIP+F +S V
Sbjct: 20 YIKALEAREYIIEQVPEELSKPKVAIICGSGLGTLASGLSAPVYEVPYEDIPHFHVSHVP 79
Query: 285 GHHGQLVFGHI--EGVSVVAMQGRFHYYEGYPLWKCCLPVRVMKLLGVKILIATNAAGGL 458
GH +L F + + V + + GR+H YEGYP+ PVR+MK++GV++++ TNAAGGL
Sbjct: 80 GHASKLYFAFLGEKRVPTMILAGRYHSYEGYPIEATTFPVRLMKVMGVEVMVVTNAAGGL 139
Query: 459 NPNYKIGDLMIVRDHINMMGFAGNNPLHGPNDERFGPRFPPMNKAYNYEFRKIAKEVAKE 638
N +K+GDLMI++DHIN G AG NPL GPN FG RFPP++ AY+ E RK+ + AK
Sbjct: 140 NQGFKVGDLMILKDHINFPGLAGMNPLRGPNAHEFGVRFPPLSDAYDLELRKLVYDAAKA 199
Query: 639 LNIDHIVREGVYTCLGGPNFETVAELNMLKMVGVDAVGMSTVHEVITARHCDIKVFGLSL 818
+ + EG Y + GP FET AE ML ++G D VGMSTV EV+ ARHC I+V +SL
Sbjct: 200 HKVSRTIHEGCYAFVSGPCFETRAESRMLALMGADCVGMSTVPEVVVARHCGIRVLAISL 259
Query: 819 ITNECITNYDQDAE 860
+TN + A+
Sbjct: 260 VTNNVVVEESPSAK 273
>SPBC12D12.06 |srb11||cyclin CycC|Schizosaccharomyces pombe|chr
2|||Manual
Length = 228
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 96 NEKTGYSYETLVETANFLLSRISEKP-NIGIIC 191
NE+ G+S E LV T +L ++ E P +I IC
Sbjct: 68 NEEKGFSLEALVATCIYLSCKVEECPVHIRTIC 100
>SPBC1706.03 |fzo1|SPBC839.01|mitochondrial fusion GTPase
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 758
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 155 ENIRETEHWHHLRLWDGFTSRKYSRRGKNTIRR 253
+++RET+ H+ +W G SRK N +RR
Sbjct: 670 KSLRETDFCHNASIWIGTESRKVLNIPLNDLRR 702
>SPBC800.11 |||inosine-uridine preferring nucleoside hydrolase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 389
Score = 27.5 bits (58), Expect = 2.7
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +3
Query: 69 PEIGSDCNGNEKTGYSYETLVETANFLLSRISEKPN-IGIICGSGMGSLAESIA 227
PE + NE Y Y T + A F++ + PN I I+ M +LA +++
Sbjct: 116 PEYETANTNNES--YIYNTQISAAQFIIDMVKANPNEITIVAAGPMTNLAIALS 167
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 27.1 bits (57), Expect = 3.6
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 159 ISEKPNIGIICGSGMGSLAESIADGVRI-PYEDIPNF 266
+S PN ++CGS G + D VR+ P E + NF
Sbjct: 261 VSSLPNGDLVCGSSDGFVRIFTVDKVRVAPTEVLKNF 297
>SPBC2A9.12 |orc6|SPBC2D10.02|origin recognition complex subunit
Orc6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 264
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +3
Query: 267 PISTVEGHHGQLVFGHIEGVSVVAMQGRFHY---YEGYPLWKCCLPVRV 404
P++ +EG+ Q I+ S +A + Y + YP+WK C+ R+
Sbjct: 204 PLNGIEGYESQKQ--RIKPWSGIASMIQIDYEKRLQNYPIWKACIEERI 250
>SPCC1682.11c |||DUF580 family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 574
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = -2
Query: 294 HDDPPLCLWESLEYLR-MVFLPRLLYFLLVN 205
H D +C+ S+ +L +V +PR LYFLL +
Sbjct: 188 HKDAIICMMLSVIWLFCLVAIPRFLYFLLAS 218
>SPBC609.05 |pob3||FACT complex component Pob3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 512
Score = 26.2 bits (55), Expect = 6.3
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3
Query: 129 VETANFLLSRISEKPNIGIICGSGMGSLAESIADGVRIPYEDIPNF 266
V+ N L+ +SEKP I SG+G + S+A+ +P +I F
Sbjct: 6 VQYDNIYLN-LSEKPGKLRIAPSGLGWKSPSLAEPFTLPISEIRRF 50
>SPAC25B8.08 |||conserved fungal family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 590
Score = 26.2 bits (55), Expect = 6.3
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Frame = +1
Query: 691 QISRQSPN*--IC*RWLE*TLLACLLFTRLSQLDTATLKCSDYL*LRMNALLITI 849
Q+++Q PN +C +WL L + ++LD T+ + MN+L ITI
Sbjct: 205 QVTQQHPNDMVLCVQWLANVSLLLFYLKKDNKLDDLTVDIQNRCSELMNSLYITI 259
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 26.2 bits (55), Expect = 6.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -3
Query: 740 YSNHL*HIQFGDCLEI 693
YS + HI FGDC E+
Sbjct: 2148 YSGKIIHIDFGDCFEV 2163
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.8 bits (54), Expect = 8.3
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = -3
Query: 740 YSNHL*HIQFGDCLEI 693
Y+ ++ HI FGDC E+
Sbjct: 2151 YTGNIIHIDFGDCFEV 2166
>SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1015
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 456 LNPNYKIGDLMIVRDHINMMGF 521
+NPNY G + V DH+ + G+
Sbjct: 189 VNPNYITGSSLAVYDHVRIDGY 210
>SPAC17C9.12 |||MSP domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 319
Score = 25.8 bits (54), Expect = 8.3
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -1
Query: 250 SYGILTPSAILSASEPIPEPQMMP 179
S + P+A ++ +EP P+PQ +P
Sbjct: 210 STAVKAPTATVAENEPYPKPQSVP 233
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,652,919
Number of Sequences: 5004
Number of extensions: 79108
Number of successful extensions: 231
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 229
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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