Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_M15
(890 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 40 3e-05
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 26 0.53
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 26 0.53
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 25 0.93
DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor p... 22 8.6
DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor p... 22 8.6
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 8.6
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 39.9 bits (89), Expect = 3e-05
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +2
Query: 191 RGIKGDQGSIGPPGIPGLQGDYGADGLEGRIGLPGVPGDWGERGDFGDKGERGTEGSYG- 367
+G++G Q + G G+ G+QG G G++G G+PG+ G + FG +G +G YG
Sbjct: 842 QGVQGVQTAQGVQGVQGVQGVQGVQGVQGVQGVPGLL--QGVQQVFG-QGVQGMNVPYGM 898
Query: 368 RRGDEGPQ 391
+RG G Q
Sbjct: 899 QRGQSGGQ 906
Score = 33.9 bits (74), Expect = 0.002
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +2
Query: 329 GDKGERGTEGSYGRRGDEGPQGLPGLEGVFGFPGL 433
G +G + +G G +G +G QG+ G++GV G PGL
Sbjct: 843 GVQGVQTAQGVQGVQGVQGVQGVQGVQGVQGVPGL 877
Score = 31.5 bits (68), Expect = 0.011
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +2
Query: 335 KGERGTEGSYGRRGDEGPQGLPGLEGVFGFPGLDG 439
+G +G + + G +G +G QG+ G++GV G G+ G
Sbjct: 842 QGVQGVQTAQGVQGVQGVQGVQGVQGVQGVQGVPG 876
Score = 30.3 bits (65), Expect = 0.025
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 341 ERGTEGSYGRRGDEGPQGLPGLEGVFGFPGLDG 439
++G +G +G +G QG+ G++GV G G+ G
Sbjct: 841 QQGVQGVQTAQGVQGVQGVQGVQGVQGVQGVQG 873
Score = 28.7 bits (61), Expect = 0.075
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 314 ERGDFGDKGERGTEGSYGRRGDEGPQGLPGLEGVFG 421
++G G + +G +G G +G +G QG+ G++GV G
Sbjct: 841 QQGVQGVQTAQGVQGVQGVQGVQGVQGVQGVQGVPG 876
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 25.8 bits (54), Expect = 0.53
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 221 GPPGIPGLQGDYGADGLEGR 280
GPPG+PG GD+ E R
Sbjct: 333 GPPGVPGDHGDHAPKQTEVR 352
Score = 23.8 bits (49), Expect = 2.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 644 GDSGLPGDEGDQGP 685
G G+PGD GD P
Sbjct: 333 GPPGVPGDHGDHAP 346
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2
Query: 284 GLPGVPGDWGE 316
G PGVPGD G+
Sbjct: 333 GPPGVPGDHGD 343
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 25.8 bits (54), Expect = 0.53
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +2
Query: 221 GPPGIPGLQGDYGADGLEGR 280
GPPG+PG GD+ E R
Sbjct: 333 GPPGVPGDHGDHAPKQTEVR 352
Score = 23.8 bits (49), Expect = 2.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 644 GDSGLPGDEGDQGP 685
G G+PGD GD P
Sbjct: 333 GPPGVPGDHGDHAP 346
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2
Query: 284 GLPGVPGDWGE 316
G PGVPGD G+
Sbjct: 333 GPPGVPGDHGD 343
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 25.0 bits (52), Expect = 0.93
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2
Query: 221 GPPGIPGLQGDY 256
GPPG+PG GD+
Sbjct: 272 GPPGVPGDHGDH 283
Score = 23.8 bits (49), Expect = 2.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 644 GDSGLPGDEGDQGP 685
G G+PGD GD P
Sbjct: 272 GPPGVPGDHGDHAP 285
Score = 22.2 bits (45), Expect = 6.5
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2
Query: 284 GLPGVPGDWGE 316
G PGVPGD G+
Sbjct: 272 GPPGVPGDHGD 282
>DQ091184-1|AAZ42364.1| 157|Apis mellifera lipophorin receptor
protein.
Length = 157
Score = 21.8 bits (44), Expect = 8.6
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 305 LPAHRVNQFFLQVHLLRSPLEGLGCPEGLCFL 210
LPA R+N +SPL CP+GL L
Sbjct: 48 LPAPRINS--------KSPLLSCACPDGLKLL 71
>DQ091183-1|AAZ42363.1| 128|Apis mellifera lipophorin receptor
protein.
Length = 128
Score = 21.8 bits (44), Expect = 8.6
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -1
Query: 305 LPAHRVNQFFLQVHLLRSPLEGLGCPEGLCFL 210
LPA R+N +SPL CP+GL L
Sbjct: 48 LPAPRINS--------KSPLLSCACPDGLKLL 71
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.8 bits (44), Expect = 8.6
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 805 TREAGLPLSPTXAXISLFSSW 743
T+ G P+SP SL SSW
Sbjct: 420 TQWQGNPISPLNDWYSLASSW 440
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,444
Number of Sequences: 438
Number of extensions: 4747
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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