Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_M14
         (880 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF132969-1|AAD27744.1|  198|Homo sapiens CGI-35 protein protein.      209   9e-54
BC080600-1|AAH80600.1|  109|Homo sapiens FCF1 protein protein.         89   1e-17
BC022441-1|AAH22441.1|  249|Homo sapiens chromosome 8 open readi...    39   0.027
BC005955-1|AAH05955.1|  249|Homo sapiens chromosome 8 open readi...    39   0.027
AK055279-1|BAB70896.1|  145|Homo sapiens protein ( Homo sapiens ...    39   0.027
BC117389-1|AAI17390.1|  499|Homo sapiens PRP31 pre-mRNA processi...    34   0.59 
AY040822-1|AAK77986.1|  499|Homo sapiens U4/U6 snRNP-associated ...    34   0.59 
AK098547-1|BAC05329.1|  364|Homo sapiens protein ( Homo sapiens ...    34   0.59 
AF308303-1|AAG48270.1|  278|Homo sapiens serologically defined b...    34   0.78 

>AF132969-1|AAD27744.1|  198|Homo sapiens CGI-35 protein protein.
          Length = 198

 Score =  209 bits (511), Expect = 9e-54
 Identities = 101/167 (60%), Positives = 123/167 (73%)
 Frame = +3

Query: 366 MGKQRKTRKIVEKRFAKMKKMISPSDSRIKNSERSEPKKKKPVDPHVIKIREVPQTSSAL 545
           MGKQ+KTRK     +A MK+M+S  D R+K  +R +PKKK+  DP  +K REVPQ  S L
Sbjct: 1   MGKQKKTRK-----YATMKRMLSLRDQRLKEKDRLKPKKKEKKDPSALKEREVPQHPSCL 55

Query: 546 FFQYNMQLGPPYHVLIDTNFINFSIKNKLDIIQNMMDCLYAKCIPYITDCVLGELEKLGR 725
           FFQYN QLGPPYH+L+DTNFINFSIK KLD++Q+MMDCLYAKCIP ITDCV+ E+EKLG+
Sbjct: 56  FFQYNTQLGPPYHILVDTNFINFSIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQ 115

Query: 726 KYRVALRIIKDPRI*EDSLSSQRYIC**LFSTKSSQHKCYIVATNDK 866
           KYRVALRI KDPR      + +          + +QHKCYIVAT D+
Sbjct: 116 KYRVALRIAKDPRFERLPCTHKGTYADDCLVQRVTQHKCYIVATVDR 162


>BC080600-1|AAH80600.1|  109|Homo sapiens FCF1 protein protein.
          Length = 109

 Score = 89.4 bits (212), Expect = 1e-17
 Identities = 43/73 (58%), Positives = 51/73 (69%)
 Frame = +3

Query: 648 MMDCLYAKCIPYITDCVLGELEKLGRKYRVALRIIKDPRI*EDSLSSQRYIC**LFSTKS 827
           MMDCLYAKCIP ITDCV+ E+EKLG+KYRVALRI KDPR      + +          + 
Sbjct: 1   MMDCLYAKCIPCITDCVMAEIEKLGQKYRVALRIAKDPRFERLPCTHKGTYADDCLVQRV 60

Query: 828 SQHKCYIVATNDK 866
           +QHKCYIVAT D+
Sbjct: 61  TQHKCYIVATVDR 73


>BC022441-1|AAH22441.1|  249|Homo sapiens chromosome 8 open reading
           frame 53 protein.
          Length = 249

 Score = 38.7 bits (86), Expect = 0.027
 Identities = 18/60 (30%), Positives = 32/60 (53%)
 Frame = +3

Query: 546 FFQYNMQLGPPYHVLIDTNFINFSIKNKLDIIQNMMDCLYAKCIPYITDCVLGELEKLGR 725
           FF+ N  +  PY +L+D  F   +++ ++ + + +   L  +     T CVL ELE LG+
Sbjct: 15  FFRNNFGVREPYQILLDGTFCQAALRGRIQLREQLPRYLMGETQLCTTRCVLKELETLGK 74


>BC005955-1|AAH05955.1|  249|Homo sapiens chromosome 8 open reading
           frame 53 protein.
          Length = 249

 Score = 38.7 bits (86), Expect = 0.027
 Identities = 18/60 (30%), Positives = 32/60 (53%)
 Frame = +3

Query: 546 FFQYNMQLGPPYHVLIDTNFINFSIKNKLDIIQNMMDCLYAKCIPYITDCVLGELEKLGR 725
           FF+ N  +  PY +L+D  F   +++ ++ + + +   L  +     T CVL ELE LG+
Sbjct: 15  FFRNNFGVREPYQILLDGTFCQAALRGRIQLREQLPRYLMGETQLCTTRCVLKELETLGK 74


>AK055279-1|BAB70896.1|  145|Homo sapiens protein ( Homo sapiens
           cDNA FLJ30717 fis, clone FCBBF2001672. ).
          Length = 145

 Score = 38.7 bits (86), Expect = 0.027
 Identities = 18/60 (30%), Positives = 32/60 (53%)
 Frame = +3

Query: 546 FFQYNMQLGPPYHVLIDTNFINFSIKNKLDIIQNMMDCLYAKCIPYITDCVLGELEKLGR 725
           FF+ N  +  PY +L+D  F   +++ ++ + + +   L  +     T CVL ELE LG+
Sbjct: 15  FFRNNFGVREPYQILLDGTFCQAALRGRIQLREQLPRYLMGETQLCTTRCVLKELETLGK 74


>BC117389-1|AAI17390.1|  499|Homo sapiens PRP31 pre-mRNA processing
           factor 31 homolog (S. cerevisiae) protein.
          Length = 499

 Score = 34.3 bits (75), Expect = 0.59
 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
 Frame = +3

Query: 504 VIKIRE-VPQTSSALFFQYNMQLGPPYHVLIDTNFINFSIKNKLDIIQNMMDCLYAKCIP 680
           ++KI E + + + A      ++  P Y V++D N +   I+N+L+II   +   Y+K  P
Sbjct: 64  MMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSKRFP 123

Query: 681 YITDCVLGELE 713
            +   V   L+
Sbjct: 124 ELESLVPNALD 134


>AY040822-1|AAK77986.1|  499|Homo sapiens U4/U6 snRNP-associated 61
           kDa protein protein.
          Length = 499

 Score = 34.3 bits (75), Expect = 0.59
 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
 Frame = +3

Query: 504 VIKIRE-VPQTSSALFFQYNMQLGPPYHVLIDTNFINFSIKNKLDIIQNMMDCLYAKCIP 680
           ++KI E + + + A      ++  P Y V++D N +   I+N+L+II   +   Y+K  P
Sbjct: 64  MMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSKRFP 123

Query: 681 YITDCVLGELE 713
            +   V   L+
Sbjct: 124 ELESLVPNALD 134


>AK098547-1|BAC05329.1|  364|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25681 fis, clone TST04131. ).
          Length = 364

 Score = 34.3 bits (75), Expect = 0.59
 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
 Frame = +3

Query: 504 VIKIRE-VPQTSSALFFQYNMQLGPPYHVLIDTNFINFSIKNKLDIIQNMMDCLYAKCIP 680
           ++KI E + + + A      ++  P Y V++D N +   I+N+L+II   +   Y+K  P
Sbjct: 64  MMKIEEYISKQAKASEVMGPVEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSKRFP 123

Query: 681 YITDCVLGELE 713
            +   V   L+
Sbjct: 124 ELESLVPNALD 134


>AF308303-1|AAG48270.1|  278|Homo sapiens serologically defined
           breast cancer antigen NY-BR-99 protein.
          Length = 278

 Score = 33.9 bits (74), Expect = 0.78
 Identities = 15/51 (29%), Positives = 27/51 (52%)
 Frame = +3

Query: 561 MQLGPPYHVLIDTNFINFSIKNKLDIIQNMMDCLYAKCIPYITDCVLGELE 713
           ++  P Y V++D N +   I+N+L+II   +   Y+K  P +   V   L+
Sbjct: 4   VEAAPEYRVIVDANNLTVEIENELNIIHKFIRDKYSKRFPELESLVPNALD 54


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,359,566
Number of Sequences: 237096
Number of extensions: 2405331
Number of successful extensions: 4165
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4160
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11215125244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)