Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_M09
         (907 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032637-12|CAA21614.1|  338|Caenorhabditis elegans Hypothetical...    79   6e-15
U23139-5|AAN65330.1|  374|Caenorhabditis elegans Hypothetical pr...    75   9e-14
AC006801-1|AAF60752.2|  501|Caenorhabditis elegans Hypothetical ...    31   0.86 
AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical...    30   2.6  
AF499444-1|AAM27195.1|  945|Caenorhabditis elegans poly ADP-ribo...    28   8.0  
AC024200-15|AAF36011.1|  945|Caenorhabditis elegans Poly(adp-rib...    28   8.0  

>AL032637-12|CAA21614.1|  338|Caenorhabditis elegans Hypothetical
           protein Y43F8C.13 protein.
          Length = 338

 Score = 78.6 bits (185), Expect = 6e-15
 Identities = 49/167 (29%), Positives = 92/167 (55%), Gaps = 7/167 (4%)
 Frame = +3

Query: 153 TTNRPKYIIDNDAGGDDAMAILIAILSEKYFDGPELIALTTGHGNTDEEQVTINNQQILK 332
           T ++ K +ID+D   DD  AI +A+   K     E++A T  HG    +Q   N ++ ++
Sbjct: 2   TVDKVKLVIDSDGVSDDVRAISLALQHPK----AEILAFTAVHGCVTVDQACANIKRTIR 57

Query: 333 LAGRQDIPIYRGSAEALVS-PFGNVW--YYGLDGLGDNNDSYTDL----FPPAEESAAFA 491
              R +IP+Y+G+A++++S P  +    ++G+DG+GD  + +  +    F    + A+ A
Sbjct: 58  ANDRSNIPVYKGAAKSILSLPKDDTVSDFFGIDGIGDKPEEFPKVERSDFEGEGKHASLA 117

Query: 492 LIENXKKYEGSLSVVTIGTLTNIAVAMKYDPKFFGPPFAFVYRSGTF 632
           LI+  ++   + ++VTIG LTN+A+A++   +F   P   V   G +
Sbjct: 118 LIDILRENRDA-TLVTIGPLTNVAIALQLCEEFSTYPSRLVIMGGNY 163


>U23139-5|AAN65330.1|  374|Caenorhabditis elegans Hypothetical
           protein F13H8.3 protein.
          Length = 374

 Score = 74.5 bits (175), Expect = 9e-14
 Identities = 54/161 (33%), Positives = 82/161 (50%), Gaps = 10/161 (6%)
 Frame = +3

Query: 132 LLLPLSATTNRP--KYIIDNDAGGDDAMAILIAILSEKYFDGPELIALTTGHGNTDEEQV 305
           L+ P   + +RP  K IID D   DD   + IA+ ++      E+IA+TT HG     Q 
Sbjct: 10  LVFPFICSVSRPTVKLIIDTDGVYDDIRGLTIALTNQNV----EVIAITTVHGGVTANQS 65

Query: 306 TINNQQILKLAGRQDIPIYRGSAEALVSPFG--NVW--YYGLDGLGDNNDSYTDLFPPAE 473
             N  ++L+  G+ ++P++ G+ ++LV P G   VW   +G DG+G   D      P   
Sbjct: 66  AANVARLLRAIGKHNVPVFIGAQDSLV-PKGPIQVWEELFGSDGIGGVPDVEPKTLPSDF 124

Query: 474 ESA----AFALIENXKKYEGSLSVVTIGTLTNIAVAMKYDP 584
            SA    A   I N  K    + +V +G LTNIA+A++ DP
Sbjct: 125 NSAQVGNAVDAIINLTKSTKDIILVGLGPLTNIAMAIRKDP 165


>AC006801-1|AAF60752.2|  501|Caenorhabditis elegans Hypothetical
           protein Y52D5A.2 protein.
          Length = 501

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 15/37 (40%), Positives = 25/37 (67%)
 Frame = -2

Query: 705 LHHHMIGLYVHQGVEFGFWVFFAIQMSRSYIQMRKAV 595
           + +H+I L+V+ GV FG  V   +Q  RSY+ +R+A+
Sbjct: 26  IRNHLINLHVYHGVLFGSEVEKILQWDRSYL-VRRAI 61


>AC024200-12|AAF36010.2| 1232|Caenorhabditis elegans Hypothetical
            protein Y71F9AL.17 protein.
          Length = 1232

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = +3

Query: 285  NTDEEQVTINNQQILKLAGRQDIPIYRGSAEALVSPFGNVWYYGLDG 425
            NTD  Q+T +      +  RQ +P+YRG         G  +  GL+G
Sbjct: 1161 NTDAHQLTYDEHNPFVVCSRQFVPLYRGRPLCKCPYCGASYSEGLEG 1207


>AF499444-1|AAM27195.1|  945|Caenorhabditis elegans poly ADP-ribose
           metabolism enzyme-1 protein.
          Length = 945

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = +1

Query: 67  PVVEQTCTSAQVIFGSSFRLSIC 135
           P++ QTC++ ++++ SS R  +C
Sbjct: 326 PIICQTCSNGKIVYNSSCRTYVC 348


>AC024200-15|AAF36011.1|  945|Caenorhabditis elegans
           Poly(adp-ribose) metabolism enzymeprotein 1 protein.
          Length = 945

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 8/23 (34%), Positives = 17/23 (73%)
 Frame = +1

Query: 67  PVVEQTCTSAQVIFGSSFRLSIC 135
           P++ QTC++ ++++ SS R  +C
Sbjct: 326 PIICQTCSNGKIVYNSSCRTYVC 348


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,557,240
Number of Sequences: 27780
Number of extensions: 409648
Number of successful extensions: 914
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 910
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)