Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_M08
(880 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58747-1|AAL27234.3| 594|Caenorhabditis elegans Hypothetical pr... 308 5e-84
U58747-2|AAQ91905.1| 393|Caenorhabditis elegans Hypothetical pr... 87 1e-17
U58747-3|AAL27233.2| 420|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U47144-3|AAB52619.1| 292|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr... 29 3.3
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro... 29 3.3
Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical p... 28 7.7
Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical p... 28 7.7
U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical pr... 28 7.7
AF047655-5|AAC04399.1| 820|Caenorhabditis elegans Hypothetical ... 28 7.7
>U58747-1|AAL27234.3| 594|Caenorhabditis elegans Hypothetical
protein C55F2.1b protein.
Length = 594
Score = 308 bits (755), Expect = 5e-84
Identities = 148/263 (56%), Positives = 192/263 (73%), Gaps = 2/263 (0%)
Frame = +1
Query: 82 MASNGKLALLSVSDKTGLLSLAKSLSECGLQLIASGGTATALRNAGLTVQDVSDITRAPE 261
M LA++SVSDKTGL+ LA L GL LIASGGTA A+R+ G+ V DV+D+T+ PE
Sbjct: 1 MTDGKSLAIISVSDKTGLIPLAHGLVSAGLTLIASGGTAKAIRDQGIDVHDVADVTKFPE 60
Query: 262 MLGGRVKTLHPAVHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSKPDVTVAD 441
MLGGRVKTLHPAVH GILAR ++SD++D+++ +SVVVCNLYPF +TV D +V +
Sbjct: 61 MLGGRVKTLHPAVHGGILARDTESDRKDLEKHNISFVSVVVCNLYPFKKTVQSKDCSVEE 120
Query: 442 AVENIDIGGVTLLRAAAKNHDRVTVVCDPADYDAVVKEIKENKHHQTTLGTRQRLALKAF 621
AVENIDIGGVTLLRAAAKNH+RV+V+CDPADYD ++ E+K TT RQ LALKAF
Sbjct: 121 AVENIDIGGVTLLRAAAKNHERVSVICDPADYDHIISELKSG---GTTRERRQLLALKAF 177
Query: 622 THTSDYDLAISDYFRKQYS-PGQAQLTLRYGMNPHQK-PAQVFTTRDSLPITTLNGAPGF 795
HT+ YD +IS + R++++ G+ L LRYG NPHQK A+++ D +PI LNG+PG+
Sbjct: 178 EHTTSYDESISGFMRRRFAGNGERALPLRYGTNPHQKDDAELYIVEDEMPIKVLNGSPGY 237
Query: 796 INLCDALNAWQLXQGAEGSAEPP 864
IN+ D LN WQL + + + P
Sbjct: 238 INILDGLNGWQLVKELSDATKMP 260
>U58747-2|AAQ91905.1| 393|Caenorhabditis elegans Hypothetical
protein C55F2.1c protein.
Length = 393
Score = 87.4 bits (207), Expect = 1e-17
Identities = 39/86 (45%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Frame = +1
Query: 613 KAFTHTSDYDLAISDYFRKQYSP-GQAQLTLRYGMNPHQKP-AQVFTTRDSLPITTLNGA 786
KAF HT+ YD +IS + R++++ G+ L LRYG NPHQK A+++ D +PI LNG+
Sbjct: 45 KAFEHTTSYDESISGFMRRRFAGNGERALPLRYGTNPHQKDDAELYIVEDEMPIKVLNGS 104
Query: 787 PGFINLCDALNAWQLXQGAEGSAEPP 864
PG+IN+ D LN WQL + + + P
Sbjct: 105 PGYINILDGLNGWQLVKELSDATKMP 130
>U58747-3|AAL27233.2| 420|Caenorhabditis elegans Hypothetical
protein C55F2.1a protein.
Length = 420
Score = 42.3 bits (95), Expect = 4e-04
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 760 LPITTLNGAPGFINLCDALNAWQLXQGAEGSAEPP 864
+PI LNG+PG+IN+ D LN WQL + + + P
Sbjct: 1 MPIKVLNGSPGYINILDGLNGWQLVKELSDATKMP 35
>U47144-3|AAB52619.1| 292|Caenorhabditis elegans Hypothetical
protein ZC53.6 protein.
Length = 292
Score = 30.3 bits (65), Expect = 1.9
Identities = 24/77 (31%), Positives = 34/77 (44%)
Frame = -3
Query: 269 PSISGALVMSDTS*TVRPAFRSAVAVPPLAINCRPHSDRLFANESRPVLSETLRRASFPF 90
PS S A S +RP +++ A P A H+D+LF E LRR +FPF
Sbjct: 6 PSSSEAPTPSGQCSRLRPRSKNSTAPEPPAPKLTDHTDKLFI--------EQLRRTTFPF 57
Query: 89 DAMFCLLKHYCVTQNLK 39
+ L + + LK
Sbjct: 58 EFQNKLDSRWTIGDMLK 74
>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical protein
C25D7.3 protein.
Length = 2150
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +1
Query: 241 DITRAPEMLGGRVKTLHPAVHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSK 420
++ +P+ + AV I +SD++ D+ R+K E S++ N+ Q +++
Sbjct: 972 ELVDSPDQVENEEPERVEAVTENIRQEMSDAEMRDLMRKKREQYSMLFPNVPQPFQPLNR 1031
Query: 421 PDVTVADA 444
DVT A
Sbjct: 1032 FDVTAPGA 1039
>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger protein
protein.
Length = 2150
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/68 (25%), Positives = 33/68 (48%)
Frame = +1
Query: 241 DITRAPEMLGGRVKTLHPAVHAGILARLSDSDQEDMKRQKYEMISVVVCNLYPFVQTVSK 420
++ +P+ + AV I +SD++ D+ R+K E S++ N+ Q +++
Sbjct: 972 ELVDSPDQVENEEPERVEAVTENIRQEMSDAEMRDLMRKKREQYSMLFPNVPQPFQPLNR 1031
Query: 421 PDVTVADA 444
DVT A
Sbjct: 1032 FDVTAPGA 1039
>Z68882-19|CAJ30225.1| 1028|Caenorhabditis elegans Hypothetical
protein C47E12.5b protein.
Length = 1028
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/25 (52%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +1
Query: 280 KTLHPAVHAGIL-ARLSDSDQEDMK 351
K+LHP+VHA +L +SD D ED++
Sbjct: 996 KSLHPSVHALVLEPMMSDPDGEDVE 1020
>Z68882-18|CAA93101.1| 1113|Caenorhabditis elegans Hypothetical
protein C47E12.5a protein.
Length = 1113
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/25 (52%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +1
Query: 280 KTLHPAVHAGIL-ARLSDSDQEDMK 351
K+LHP+VHA +L +SD D ED++
Sbjct: 1081 KSLHPSVHALVLEPMMSDPDGEDVE 1105
>U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical
protein K09H11.4 protein.
Length = 630
Score = 28.3 bits (60), Expect = 7.7
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +3
Query: 183 QWRYRHGASERRPHSSRCVGHHESTGDARRSGENFT---SSGTCWDLSSIIRL*PGRHET 353
++R RHG E P R HH G+ + EN S ++ + + P +
Sbjct: 213 KYRPRHGEEEEEPSRER--EHHHHRGEEKPETENIAETPSKVVGLNMQMVAGVYPKEKKG 270
Query: 354 SEVRD-DKRGG 383
V D DKRGG
Sbjct: 271 PVVEDVDKRGG 281
>AF047655-5|AAC04399.1| 820|Caenorhabditis elegans Hypothetical
protein C17B7.5 protein.
Length = 820
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/57 (31%), Positives = 31/57 (54%)
Frame = -1
Query: 379 PRLSSRTSDVSCLPGQSRIIELRSQHVPLDVKFSPDLRASPVLS*CPTHLEL*GRRS 209
P S+ T+DVS + R IE + D + + D+ ++P+L+ H++L GR S
Sbjct: 591 PETSTATTDVSQMTTTPRSIETTTPSTSNDTESNQDVISTPLLAWRQGHIDL-GRIS 646
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,371,127
Number of Sequences: 27780
Number of extensions: 377307
Number of successful extensions: 1172
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1165
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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