Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP22_F_M05
(915 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48638-7|CAA88571.2| 340|Caenorhabditis elegans Hypothetical pr... 71 2e-12
U40424-2|AAA81458.3| 343|Caenorhabditis elegans Hypothetical pr... 66 3e-11
AC006749-2|AAF60533.3| 731|Caenorhabditis elegans Hypothetical ... 31 1.5
Z81119-1|CAB03331.1| 363|Caenorhabditis elegans Hypothetical pr... 29 4.6
U70852-10|AAO91718.1| 505|Caenorhabditis elegans Hypothetical p... 28 8.1
U70852-9|ABB51183.1| 784|Caenorhabditis elegans Hypothetical pr... 28 8.1
U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical pr... 28 8.1
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 28 8.1
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 28 8.1
DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-t... 28 8.1
AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-t... 28 8.1
AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical ... 28 8.1
AF045640-7|AAU05589.1| 978|Caenorhabditis elegans Novel channel... 28 8.1
AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel... 28 8.1
AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel... 28 8.1
AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel... 28 8.1
>Z48638-7|CAA88571.2| 340|Caenorhabditis elegans Hypothetical
protein ZK892.4 protein.
Length = 340
Score = 70.5 bits (165), Expect = 2e-12
Identities = 42/133 (31%), Positives = 69/133 (51%), Gaps = 2/133 (1%)
Frame = +3
Query: 354 QSVNRNKKSICIDFKSQEGKKIIYDLAKKCDVLVENFIPGKLDQMDVGYEKLKTVNPKLI 533
Q +NR K +D K+ E K + DL + DVL++ + PG L++M + L N LI
Sbjct: 45 QRLNRGKTMKQLDLKNPEDIKKVRDLCQTSDVLLDPYRPGTLEKMGLDPSTLWNNNKGLI 104
Query: 534 YCAITGFGPXGXYTKKXGYDVIAAAMGGLLHT-TGERNGNPVKTGVAITDIT-TGLHAFG 707
C I+G+G G +++ G+D+ A+ G+L T +G P + D GL A
Sbjct: 105 ICKISGYGQTGRMSQETGHDINYVALSGMLPTFSGVNATRPWPPANMLADFAGGGLSAAF 164
Query: 708 AVMAALYHRNSTG 746
+++A+Y R+ G
Sbjct: 165 GILSAIYARSHNG 177
>U40424-2|AAA81458.3| 343|Caenorhabditis elegans Hypothetical
protein C24A3.4 protein.
Length = 343
Score = 66.1 bits (154), Expect = 3e-11
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Frame = +3
Query: 354 QSVNRNKKSICIDFKSQEGKKIIYDLAKKCDVLVENFIPGKLDQMDVGYEKLKTVNPKLI 533
Q +NR K D + E K + DL + DVL++ + PG L++M + L N LI
Sbjct: 45 QRMNRGKSMKEFDLRKSEDIKKVRDLCRTSDVLLDPYRPGTLEKMGLDPLSLWNDNKGLI 104
Query: 534 YCAITGFGPXGXYTKKXGYDVIAAAMGGLLHT-TGERNGNPVKTGVAITDIT-TGLHAFG 707
C I+G+G G +++ G+D+ AM G+L T G P + D GL A
Sbjct: 105 ICRISGYGQTGRMSQEAGHDINYVAMSGMLPTFAGAEASRPWPPVNMLADFAGGGLSAAF 164
Query: 708 AVMAALYHRNSTG 746
+++A++ R G
Sbjct: 165 GIVSAIHARTHNG 177
>AC006749-2|AAF60533.3| 731|Caenorhabditis elegans Hypothetical
protein Y39D8B.3 protein.
Length = 731
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = -3
Query: 709 APKACRPVVMSVIATPVFTGFP-LRSPVVCNSPPIAAAITSYPXF---FVYXPXGPKPVI 542
+P A P+++S A F G P L +P++ SP + + + P F FV P P +
Sbjct: 654 SPVALTPIILSPFALSPFIGVPNLMTPIIL-SPFVLSPLILSPPFVSAFVLTPYALSPTV 712
Query: 541 AQYISLGLTVLSFSYPTSI 485
++ VLS S+ +++
Sbjct: 713 LSSGAVFTAVLSPSWLSTL 731
>Z81119-1|CAB03331.1| 363|Caenorhabditis elegans Hypothetical
protein T10H4.2 protein.
Length = 363
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -3
Query: 490 SIWSSFPGMKFSTSTSHFFARSYIIFFPSCDLKSIQMLFLFLFT 359
+IW SF M S + HFF R + P +K ++F +T
Sbjct: 96 TIWCSFYAMMLSLLSIHFFYRYTSVTAPILLMKRFSCRYIFKYT 139
>U70852-10|AAO91718.1| 505|Caenorhabditis elegans Hypothetical
protein F45E4.7b protein.
Length = 505
Score = 28.3 bits (60), Expect = 8.1
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Frame = -3
Query: 730 WYNAAMTAPKACRPVVMSVIATPV----FTGFPLRSPVVCNSPPIAAAITSYPXFF--VY 569
++++ + KA R MS I T + T FP+ P + + + A + +Y
Sbjct: 287 YFDSMIRVGKAERDYTMSQIGTYLDNDDTTTFPISDPTMLYNSNVGAIVIPLAFIEPPIY 346
Query: 568 XPXGPKPVIAQYISLGLTVL 509
P P+ Y SLG+T L
Sbjct: 347 LPGDEVPMYGIYSSLGITTL 366
>U70852-9|ABB51183.1| 784|Caenorhabditis elegans Hypothetical
protein F45E4.7c protein.
Length = 784
Score = 28.3 bits (60), Expect = 8.1
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Frame = -3
Query: 730 WYNAAMTAPKACRPVVMSVIATPV----FTGFPLRSPVVCNSPPIAAAITSYPXFF--VY 569
++++ + KA R MS I T + T FP+ P + + + A + +Y
Sbjct: 566 YFDSMIRVGKAERDYTMSQIGTYLDNDDTTTFPISDPTMLYNSNVGAIVIPLAFIEPPIY 625
Query: 568 XPXGPKPVIAQYISLGLTVL 509
P P+ Y SLG+T L
Sbjct: 626 LPGDEVPMYGIYSSLGITTL 645
>U70852-8|ABB51182.1| 868|Caenorhabditis elegans Hypothetical
protein F45E4.7a protein.
Length = 868
Score = 28.3 bits (60), Expect = 8.1
Identities = 21/80 (26%), Positives = 35/80 (43%), Gaps = 6/80 (7%)
Frame = -3
Query: 730 WYNAAMTAPKACRPVVMSVIATPV----FTGFPLRSPVVCNSPPIAAAITSYPXFF--VY 569
++++ + KA R MS I T + T FP+ P + + + A + +Y
Sbjct: 650 YFDSMIRVGKAERDYTMSQIGTYLDNDDTTTFPISDPTMLYNSNVGAIVIPLAFIEPPIY 709
Query: 568 XPXGPKPVIAQYISLGLTVL 509
P P+ Y SLG+T L
Sbjct: 710 LPGDEVPMYGIYSSLGITTL 729
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -3
Query: 340 NPRSPS*XGGPHFRASSPLRLSTFITFAPKSPQGHITS 227
NP SP P + +SP T ++ P SPQ TS
Sbjct: 1766 NPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTS 1803
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.elegans
RNA polymeraseII largest subunit (ama-1 IV) gene,
complete cds. ).
Length = 1859
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -3
Query: 340 NPRSPS*XGGPHFRASSPLRLSTFITFAPKSPQGHITS 227
NP SP P + +SP T ++ P SPQ TS
Sbjct: 1773 NPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTS 1810
>DQ917240-1|ABI94563.1| 1797|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1797
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 548 CDSTVYKLRVDSFKLFISYIHLVQF 474
CDS+ R F +FIS IHL+ F
Sbjct: 110 CDSSYLSNRWSQFSVFISIIHLLSF 134
>AY555271-1|AAS65871.2| 1831|Caenorhabditis elegans four domain-type
voltage-gatedion channel alpha-1 subunit protein.
Length = 1831
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 548 CDSTVYKLRVDSFKLFISYIHLVQF 474
CDS+ R F +FIS IHL+ F
Sbjct: 110 CDSSYLSNRWSQFSVFISIIHLLSF 134
>AL031635-4|CAA21043.2| 269|Caenorhabditis elegans Hypothetical
protein Y47D3B.6 protein.
Length = 269
Score = 28.3 bits (60), Expect = 8.1
Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 3/70 (4%)
Frame = -3
Query: 721 AAMTAPKACRPVVMSVIATPVFTGFPLRSPVVCNSP---PIAAAITSYPXFFVYXPXGPK 551
A++ P A P +M P+ P P +P P+ AA P F P
Sbjct: 41 ASVCIPTAAAPPMMMAPPAPLPAYAPAPLPAYAPAPLPAPVFAAPAPAPVFAAPFAAPPA 100
Query: 550 PVIAQYISLG 521
PVIA +LG
Sbjct: 101 PVIAAQPALG 110
>AF045640-7|AAU05589.1| 978|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
b protein.
Length = 978
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 548 CDSTVYKLRVDSFKLFISYIHLVQF 474
CDS+ R F +FIS IHL+ F
Sbjct: 168 CDSSYLSNRWSQFSVFISIIHLLSF 192
>AF045640-6|AAU05588.1| 1562|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
a protein.
Length = 1562
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 548 CDSTVYKLRVDSFKLFISYIHLVQF 474
CDS+ R F +FIS IHL+ F
Sbjct: 168 CDSSYLSNRWSQFSVFISIIHLLSF 192
>AF045640-5|AAM81121.1| 1913|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
c protein.
Length = 1913
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 548 CDSTVYKLRVDSFKLFISYIHLVQF 474
CDS+ R F +FIS IHL+ F
Sbjct: 168 CDSSYLSNRWSQFSVFISIIHLLSF 192
>AF045640-4|AAU05590.1| 1861|Caenorhabditis elegans Novel channel
type/putative nematodecalcium channel protein 1, isoform
d protein.
Length = 1861
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 548 CDSTVYKLRVDSFKLFISYIHLVQF 474
CDS+ R F +FIS IHL+ F
Sbjct: 140 CDSSYLSNRWSQFSVFISIIHLLSF 164
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,113,117
Number of Sequences: 27780
Number of extensions: 302317
Number of successful extensions: 765
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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