Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_M05
         (915 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   1.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   1.3  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    25   1.3  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    24   1.7  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    22   8.9  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    22   8.9  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    22   8.9  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 471  GKLDQMDVGYEKLKTVNPKLIYCAITGFGPXG 566
            G +   +VGY +  + NP   + +++G G  G
Sbjct: 1037 GDIQGFNVGYRETSSSNPSYNFSSVSGDGEEG 1068


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 9/32 (28%), Positives = 17/32 (53%)
 Frame = +3

Query: 471  GKLDQMDVGYEKLKTVNPKLIYCAITGFGPXG 566
            G +   +VGY +  + NP   + +++G G  G
Sbjct: 1033 GDIQGFNVGYRETSSSNPSYNFSSVSGDGEEG 1064


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 24.6 bits (51), Expect = 1.3
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -2

Query: 710 CSEGMQASCNVSDCYTC 660
           C+EGMQ SCN   C  C
Sbjct: 79  CAEGMQCSCN--KCIGC 93


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -3

Query: 490 SIWSSFPGMKFSTSTSHFFARSYI 419
           ++WS  P M +  ST+H  A+ ++
Sbjct: 99  ALWSLVPHMAWQLSTAHLLAQLFL 122


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 625 CNSPPIAAAITSYPXFFVY 569
           C+S P AA I+    FF+Y
Sbjct: 120 CSSHPTAAFISYGTLFFIY 138


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 625 CNSPPIAAAITSYPXFFVY 569
           C+S P AA I+    FF+Y
Sbjct: 119 CSSHPTAAFISYGTLFFIY 137


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 624 HTTGERNGNPVKTGVAI 674
           HT  E + NP+KT +++
Sbjct: 71  HTIIEMDSNPIKTALSV 87


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,478
Number of Sequences: 438
Number of extensions: 3433
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29750994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)