Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_M03
         (898 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66494-4|CAA91263.1|  599|Caenorhabditis elegans Hypothetical pr...    81   1e-15
AL132949-21|CAB61098.1|  866|Caenorhabditis elegans Hypothetical...    28   7.9  
AF100656-10|AAF99967.1|  301|Caenorhabditis elegans Hypothetical...    28   7.9  

>Z66494-4|CAA91263.1|  599|Caenorhabditis elegans Hypothetical
           protein C34C6.4 protein.
          Length = 599

 Score = 81.0 bits (191), Expect = 1e-15
 Identities = 44/110 (40%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
 Frame = +1

Query: 340 NRLSEISDWKVLLVEAGG-NPTLATEIPQP---YYSNMGTSEDWAYHTEPQEGACRAYKN 507
           NRL+E    +VLL+EAG  +      I  P    Y+    + +W YHT  Q+       N
Sbjct: 54  NRLTEDPSNRVLLIEAGPVDHKWDWRIHMPAALMYNLCSDTYNWHYHTTAQKNL----GN 109

Query: 508 KGCAWPRGKVLGGSSSINLMFYVRGNKADYDEWAADGNEGWSFEDVLPYF 657
           +   WPRG+V GGSS++N M YVRG+  DY+ W  +G  GW++ + LPYF
Sbjct: 110 RVFYWPRGRVWGGSSTLNAMCYVRGHAYDYNRWEKEGASGWNYANCLPYF 159


>AL132949-21|CAB61098.1|  866|Caenorhabditis elegans Hypothetical
           protein Y53F4B.24 protein.
          Length = 866

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = -1

Query: 736 LR*PPLAVVFKSPPASNLXHEAFTFLKSRARRPRNSSLHF 617
           +R PPL V+F   P   L  E    LKS  + PR S L F
Sbjct: 293 IRSPPLEVLFPPLPVQQLQEEDLKSLKS-LKSPRLSKLDF 331



 Score = 28.3 bits (60), Expect = 7.9
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = -1

Query: 736 LR*PPLAVVFKSPPASNLXHEAFTFLKSRARRPRNSSLHF 617
           +R PPL V+F   P   L  E    LKS  + PR S L F
Sbjct: 810 IRSPPLEVLFPPLPVQQLQEEDLKSLKS-LKSPRVSKLDF 848


>AF100656-10|AAF99967.1|  301|Caenorhabditis elegans Hypothetical
           protein F49F1.11 protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = +1

Query: 436 NMGTSEDWAYH--TEPQEGACRAYKNKGCAWPRGKVLGGS 549
           N+  S+ W +H  +EP +G     ++   AW  G+  GG+
Sbjct: 129 NLAKSKVWVFHFASEPTKGLVARTRHTNGAWEVGETYGGN 168


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,571,447
Number of Sequences: 27780
Number of extensions: 395274
Number of successful extensions: 1014
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1013
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)