Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_M01
         (1023 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       31   1.1  
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    30   3.4  
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078     29   4.5  
11_01_0452 - 3503827-3504010,3504366-3504559                           29   7.9  
09_04_0506 - 18188785-18190599                                         29   7.9  
07_03_1573 + 27829967-27830338,27830821-27831510,27831594-278317...    29   7.9  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 31.5 bits (68), Expect = 1.1
 Identities = 13/31 (41%), Positives = 14/31 (45%)
 Frame = -2

Query: 542 PPXXRPPXPXRWPAXPXPGKGPXXPRPXXXG 450
           P    PP P + P  P P KGP  P P   G
Sbjct: 341 PKGPPPPPPAKGPPPPPPPKGPSPPPPPPPG 371



 Score = 31.1 bits (67), Expect = 1.5
 Identities = 12/27 (44%), Positives = 13/27 (48%)
 Frame = -2

Query: 542 PPXXRPPXPXRWPAXPXPGKGPXXPRP 462
           P    PP P + P  P P KGP  P P
Sbjct: 332 PKAAPPPPPPKGPPPPPPAKGPPPPPP 358


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 20/54 (37%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
 Frame = +3

Query: 483  LXGXRXSGPPXGXRXXXXGGXPXPXTXXRGXPPXRPXRXRGG-GXXPSXAXXPA 641
            L G     PP G R    GG P P       PP  P R  GG G  P+    PA
Sbjct: 1157 LGGPPAPPPPAGFR----GGTPPPNAHGGVAPPPPPPRGHGGVGGPPTPPGAPA 1206


>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
          Length = 1034

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 14/27 (51%), Positives = 15/27 (55%)
 Frame = +1

Query: 463 GRGXXGPXPGXGXAGHRXGXGGRXXGG 543
           GRG  GP  G G  G+  G GGR  GG
Sbjct: 42  GRGGRGPPGGGGGRGYEPG-GGRGYGG 67


>11_01_0452 - 3503827-3504010,3504366-3504559
          Length = 125

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = +1

Query: 463 GRGXXG-PXPGXGXAGHRXGXGGRXXG 540
           GRG    P PG G  GHR G GG   G
Sbjct: 53  GRGAGRRPLPGKGERGHRRGVGGDGVG 79


>09_04_0506 - 18188785-18190599
          Length = 604

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 14/31 (45%), Positives = 14/31 (45%)
 Frame = +1

Query: 463 GRGXXGPXPGXGXAGHRXGXGGRXXGGXPXR 555
           GRG  G  PG G  G   G  GR  GG   R
Sbjct: 312 GRGGGGGGPGGGGGGGGGGNWGRGGGGMGGR 342


>07_03_1573 +
           27829967-27830338,27830821-27831510,27831594-27831781,
           27832286-27832318,27832364-27832605,27833178-27833320,
           27833649-27833825,27834104-27834256,27834639-27834694,
           27834998-27835157,27835301-27835348
          Length = 753

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 12/27 (44%), Positives = 12/27 (44%)
 Frame = -2

Query: 542 PPXXRPPXPXRWPAXPXPGKGPXXPRP 462
           P    PP   R P  P PG GP   RP
Sbjct: 34  PTPPPPPPRRRTPPPPPPGSGPGPQRP 60


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,064,026
Number of Sequences: 37544
Number of extensions: 206500
Number of successful extensions: 1144
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1084
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3001039372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)