Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_L24
         (911 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0404 + 3093851-3094051,3094622-3094948,3096685-3096798,309...    31   1.7  
07_01_0400 + 3048607-3048807,3049378-3049704,3051441-3051554,305...    31   1.7  
07_01_0396 + 3016900-3017175,3017926-3018039,3018138-3018350,301...    31   1.7  
12_02_0979 - 25009721-25009975,25010058-25010127,25010216-250103...    29   3.9  

>07_01_0404 +
           3093851-3094051,3094622-3094948,3096685-3096798,
           3096897-3097109,3097975-3098151,3098270-3100091,
           3100107-3100927,3101070-3101390
          Length = 1331

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = +1

Query: 421 NHYTSIIIAASNTNDLLVCKQTKKEMINMVFFNE-AWMVFFFLHIYKCTFIILNASFG 591
           NH      AA +TN LL+  Q   E++N +F N  A  +F  + ++    I L ++ G
Sbjct: 316 NHVLMNSAAADSTNTLLLTFQDVVELMNQIFVNPMAPTIFLVVLLFSSHIISLTSAIG 373


>07_01_0400 +
           3048607-3048807,3049378-3049704,3051441-3051554,
           3051653-3051865,3052731-3052907,3053026-3054847,
           3054863-3055683,3055826-3056146
          Length = 1331

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = +1

Query: 421 NHYTSIIIAASNTNDLLVCKQTKKEMINMVFFNE-AWMVFFFLHIYKCTFIILNASFG 591
           NH      AA +TN LL+  Q   E++N +F N  A  +F  + ++    I L ++ G
Sbjct: 316 NHVLMNSAAADSTNTLLLTFQDVVELMNQIFVNPMAPTIFLVVLLFSSHIISLTSAIG 373


>07_01_0396 +
           3016900-3017175,3017926-3018039,3018138-3018350,
           3019216-3019392,3019511-3021332,3021348-3022168,
           3022311-3022631
          Length = 1247

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = +1

Query: 421 NHYTSIIIAASNTNDLLVCKQTKKEMINMVFFNE-AWMVFFFLHIYKCTFIILNASFG 591
           NH      AA +TN LL+  Q   E++N +F N  A  +F  + ++    I L ++ G
Sbjct: 232 NHVLMNSAAADSTNTLLLTFQDVVELMNQIFVNPMAPTIFLVVLLFSSHIISLTSAIG 289


>12_02_0979 -
           25009721-25009975,25010058-25010127,25010216-25010381,
           25010501-25010651,25010843-25010890,25011172-25011225,
           25011400-25011513,25012666-25012782,25012899-25012991,
           25013085-25013123,25013990-25014055
          Length = 390

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 13/26 (50%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
 Frame = +1

Query: 49  VFFFKXNPLTWI-IVFGRIFVYYFSL 123
           +F FK NP TW  +++G+I+VYY+ L
Sbjct: 288 IFMFK-NPSTWTNLLYGQIWVYYWVL 312


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,535,141
Number of Sequences: 37544
Number of extensions: 355223
Number of successful extensions: 595
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)