Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP22_F_L24
         (911 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024859-26|AAK29977.2|  300|Caenorhabditis elegans Hypothetical...    29   6.1  

>AC024859-26|AAK29977.2|  300|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.2 protein.
          Length = 300

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 11/99 (11%)
 Frame = +1

Query: 418 CNHYTSIIIAASNTNDLLVCKQTKKEMINMVFFNEAWMVFFFLHIYKCTFIIL-----NA 582
           CNH   I +  + TN L  C   KK      F     ++FF L        ++     NA
Sbjct: 166 CNHCNEIFLFNTLTNALANCPHCKKYSTVGSFARRRALLFFILAATVAVLAVILTMLTNA 225

Query: 583 SFGKLF-----FL-ISANVPPKTTMHRERVQKVELTNNK 681
           S G +F     FL IS  +  K  + +++   +++T NK
Sbjct: 226 SVGPVFTWSAEFLRISRKIELKNIIFQKKNVVLKITFNK 264


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,892,368
Number of Sequences: 27780
Number of extensions: 388368
Number of successful extensions: 970
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 970
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)